Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCDC168Q8NDH2 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
CCDC168Q8NDH2 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CCDC168Q8NDH2 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.69□□□□□ -0.38
CCDC168Q8NDH2 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCDC168Q8NDH2 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCDC168Q8NDH2 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCDC168Q8NDH2 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC12.69□□□□□ -0.38
CCDC168Q8NDH2 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
CCDC168Q8NDH2 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
CCDC168Q8NDH2 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCDC168Q8NDH2 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC12.69□□□□□ -0.38
CCDC168Q8NDH2 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC12.69□□□□□ -0.38
CCDC168Q8NDH2 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CCDC168Q8NDH2 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC12.69□□□□□ -0.38
CCDC168Q8NDH2 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.69□□□□□ -0.38
CCDC168Q8NDH2 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC12.69□□□□□ -0.38
CCDC168Q8NDH2 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
CCDC168Q8NDH2 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC12.69□□□□□ -0.38
CCDC168Q8NDH2 STUB1-204ENST00000564370 875 ntTSL 2 BASIC12.69□□□□□ -0.38
CCDC168Q8NDH2 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC12.69□□□□□ -0.38
CCDC168Q8NDH2 SNORD3B-2-202ENST00000571722 791 ntBASIC12.69□□□□□ -0.38
CCDC168Q8NDH2 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC12.69□□□□□ -0.38
CCDC168Q8NDH2 AC011247.3-201ENST00000603297 438 ntBASIC12.69□□□□□ -0.38
CCDC168Q8NDH2 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
CCDC168Q8NDH2 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCDC168Q8NDH2 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCDC168Q8NDH2 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCDC168Q8NDH2 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCDC168Q8NDH2 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCDC168Q8NDH2 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCDC168Q8NDH2 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCDC168Q8NDH2 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CCDC168Q8NDH2 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CCDC168Q8NDH2 AC005915.1-201ENST00000624912 2018 ntBASIC12.69□□□□□ -0.38
CCDC168Q8NDH2 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCDC168Q8NDH2 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC12.68□□□□□ -0.38
CCDC168Q8NDH2 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CCDC168Q8NDH2 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CCDC168Q8NDH2 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCDC168Q8NDH2 AP001094.4-201ENST00000579008 2176 ntBASIC12.68□□□□□ -0.38
CCDC168Q8NDH2 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCDC168Q8NDH2 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCDC168Q8NDH2 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CCDC168Q8NDH2 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC12.68□□□□□ -0.38
CCDC168Q8NDH2 AC024293.1-201ENST00000467930 498 ntBASIC12.68□□□□□ -0.38
CCDC168Q8NDH2 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC12.68□□□□□ -0.38
CCDC168Q8NDH2 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
CCDC168Q8NDH2 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CCDC168Q8NDH2 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC12.68□□□□□ -0.38
CCDC168Q8NDH2 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CCDC168Q8NDH2 AC011477.6-201ENST00000604980 1927 ntBASIC12.68□□□□□ -0.38
CCDC168Q8NDH2 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CCDC168Q8NDH2 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCDC168Q8NDH2 IL9RP3-201ENST00000442856 1674 ntBASIC12.68□□□□□ -0.38
CCDC168Q8NDH2 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
CCDC168Q8NDH2 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC12.68□□□□□ -0.38
CCDC168Q8NDH2 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCDC168Q8NDH2 LINC01815-202ENST00000641468 1409 ntBASIC12.68□□□□□ -0.38
CCDC168Q8NDH2 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC12.68□□□□□ -0.38
CCDC168Q8NDH2 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CCDC168Q8NDH2 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
CCDC168Q8NDH2 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCDC168Q8NDH2 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
CCDC168Q8NDH2 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCDC168Q8NDH2 MIR557-201ENST00000385239 98 ntBASIC12.68□□□□□ -0.38
CCDC168Q8NDH2 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CCDC168Q8NDH2 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC12.68□□□□□ -0.38
CCDC168Q8NDH2 AC092638.2-201ENST00000441105 947 ntBASIC12.68□□□□□ -0.38
CCDC168Q8NDH2 RN7SL396P-201ENST00000471086 295 ntBASIC12.68□□□□□ -0.38
CCDC168Q8NDH2 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC12.68□□□□□ -0.38
CCDC168Q8NDH2 MIR6816-201ENST00000620368 66 ntBASIC12.68□□□□□ -0.38
CCDC168Q8NDH2 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC12.68□□□□□ -0.38
CCDC168Q8NDH2 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC12.68□□□□□ -0.38
CCDC168Q8NDH2 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC12.68□□□□□ -0.38
CCDC168Q8NDH2 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
CCDC168Q8NDH2 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCDC168Q8NDH2 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCDC168Q8NDH2 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCDC168Q8NDH2 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCDC168Q8NDH2 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC12.68□□□□□ -0.38
CCDC168Q8NDH2 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCDC168Q8NDH2 PCDH8P1-201ENST00000428983 2773 ntBASIC12.67□□□□□ -0.38
CCDC168Q8NDH2 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCDC168Q8NDH2 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCDC168Q8NDH2 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC12.67□□□□□ -0.38
CCDC168Q8NDH2 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CCDC168Q8NDH2 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCDC168Q8NDH2 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCDC168Q8NDH2 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCDC168Q8NDH2 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CCDC168Q8NDH2 OR2K2-202ENST00000374428 1038 ntBASIC12.67□□□□□ -0.38
CCDC168Q8NDH2 AQP7P5-201ENST00000428759 1049 ntBASIC12.67□□□□□ -0.38
CCDC168Q8NDH2 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC12.67□□□□□ -0.38
CCDC168Q8NDH2 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CCDC168Q8NDH2 AQP7P4-201ENST00000447083 1042 ntBASIC12.67□□□□□ -0.38
CCDC168Q8NDH2 AQP7P2-201ENST00000453967 1041 ntBASIC12.67□□□□□ -0.38
CCDC168Q8NDH2 DUX4L46-201ENST00000566845 751 ntBASIC12.67□□□□□ -0.38
CCDC168Q8NDH2 THY1-209ENST00000580275 578 ntTSL 3 BASIC12.67□□□□□ -0.38
CCDC168Q8NDH2 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms