Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.27□□□□□ -0.12
CDRT4Q8N9R6 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDRT4Q8N9R6 AC013726.1-201ENST00000563747 2285 ntBASIC14.27□□□□□ -0.12
CDRT4Q8N9R6 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CDRT4Q8N9R6 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CDRT4Q8N9R6 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDRT4Q8N9R6 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDRT4Q8N9R6 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.27□□□□□ -0.12
CDRT4Q8N9R6 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CDRT4Q8N9R6 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDRT4Q8N9R6 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CDRT4Q8N9R6 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDRT4Q8N9R6 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDRT4Q8N9R6 AL138799.1-201ENST00000448213 1675 ntBASIC14.27□□□□□ -0.12
CDRT4Q8N9R6 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDRT4Q8N9R6 AC007787.1-201ENST00000588095 1583 ntBASIC14.27□□□□□ -0.12
CDRT4Q8N9R6 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CDRT4Q8N9R6 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CDRT4Q8N9R6 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
CDRT4Q8N9R6 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDRT4Q8N9R6 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDRT4Q8N9R6 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDRT4Q8N9R6 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDRT4Q8N9R6 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDRT4Q8N9R6 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
CDRT4Q8N9R6 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDRT4Q8N9R6 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDRT4Q8N9R6 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
CDRT4Q8N9R6 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
CDRT4Q8N9R6 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.27□□□□□ -0.13
CDRT4Q8N9R6 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CDRT4Q8N9R6 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CDRT4Q8N9R6 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDRT4Q8N9R6 AL645937.2-201ENST00000396808 931 ntBASIC14.27□□□□□ -0.13
CDRT4Q8N9R6 AC087499.6-201ENST00000411576 835 ntBASIC14.27□□□□□ -0.13
CDRT4Q8N9R6 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.27□□□□□ -0.13
CDRT4Q8N9R6 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CDRT4Q8N9R6 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.27□□□□□ -0.13
CDRT4Q8N9R6 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.27□□□□□ -0.13
CDRT4Q8N9R6 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.27□□□□□ -0.13
CDRT4Q8N9R6 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.27□□□□□ -0.13
CDRT4Q8N9R6 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.27□□□□□ -0.13
CDRT4Q8N9R6 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.27□□□□□ -0.13
CDRT4Q8N9R6 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.27□□□□□ -0.13
CDRT4Q8N9R6 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDRT4Q8N9R6 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDRT4Q8N9R6 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDRT4Q8N9R6 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CDRT4Q8N9R6 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDRT4Q8N9R6 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.27□□□□□ -0.13
CDRT4Q8N9R6 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDRT4Q8N9R6 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDRT4Q8N9R6 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
CDRT4Q8N9R6 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CDRT4Q8N9R6 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CDRT4Q8N9R6 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDRT4Q8N9R6 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDRT4Q8N9R6 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CDRT4Q8N9R6 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDRT4Q8N9R6 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.27□□□□□ -0.13
CDRT4Q8N9R6 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.27□□□□□ -0.13
CDRT4Q8N9R6 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.27□□□□□ -0.13
CDRT4Q8N9R6 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
CDRT4Q8N9R6 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
CDRT4Q8N9R6 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.26□□□□□ -0.13
CDRT4Q8N9R6 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CDRT4Q8N9R6 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CDRT4Q8N9R6 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDRT4Q8N9R6 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDRT4Q8N9R6 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDRT4Q8N9R6 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDRT4Q8N9R6 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDRT4Q8N9R6 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.26□□□□□ -0.13
CDRT4Q8N9R6 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDRT4Q8N9R6 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
CDRT4Q8N9R6 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDRT4Q8N9R6 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDRT4Q8N9R6 INTS4P2-202ENST00000614726 2019 ntBASIC14.26□□□□□ -0.13
CDRT4Q8N9R6 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDRT4Q8N9R6 AC093525.8-201ENST00000624099 1342 ntBASIC14.26□□□□□ -0.13
CDRT4Q8N9R6 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDRT4Q8N9R6 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDRT4Q8N9R6 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.26□□□□□ -0.13
CDRT4Q8N9R6 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDRT4Q8N9R6 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDRT4Q8N9R6 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDRT4Q8N9R6 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.26□□□□□ -0.13
CDRT4Q8N9R6 AC134915.1-201ENST00000426461 574 ntBASIC14.26□□□□□ -0.13
CDRT4Q8N9R6 AL442647.2-201ENST00000429864 857 ntBASIC14.26□□□□□ -0.13
CDRT4Q8N9R6 AL353779.1-201ENST00000434793 351 ntBASIC14.26□□□□□ -0.13
CDRT4Q8N9R6 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.26□□□□□ -0.13
CDRT4Q8N9R6 BCRP1-201ENST00000444246 691 ntBASIC14.26□□□□□ -0.13
CDRT4Q8N9R6 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDRT4Q8N9R6 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CDRT4Q8N9R6 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.26□□□□□ -0.13
CDRT4Q8N9R6 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.26□□□□□ -0.13
CDRT4Q8N9R6 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.26□□□□□ -0.13
CDRT4Q8N9R6 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.26□□□□□ -0.13
CDRT4Q8N9R6 SPCS2P1-201ENST00000561636 679 ntBASIC14.26□□□□□ -0.13
CDRT4Q8N9R6 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms