Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 KRT8P28-201ENST00000433288 1390 ntBASIC14.05□□□□□ -0.16
COL27A1Q8IZC6 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COL27A1Q8IZC6 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
COL27A1Q8IZC6 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COL27A1Q8IZC6 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COL27A1Q8IZC6 AL118508.1-201ENST00000613502 2345 ntBASIC14.05□□□□□ -0.16
COL27A1Q8IZC6 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COL27A1Q8IZC6 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.05□□□□□ -0.16
COL27A1Q8IZC6 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COL27A1Q8IZC6 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COL27A1Q8IZC6 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COL27A1Q8IZC6 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COL27A1Q8IZC6 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL27A1Q8IZC6 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.04□□□□□ -0.16
COL27A1Q8IZC6 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL27A1Q8IZC6 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
COL27A1Q8IZC6 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.04□□□□□ -0.16
COL27A1Q8IZC6 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.04□□□□□ -0.16
COL27A1Q8IZC6 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
COL27A1Q8IZC6 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL27A1Q8IZC6 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL27A1Q8IZC6 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC14.04□□□□□ -0.16
COL27A1Q8IZC6 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
COL27A1Q8IZC6 AL583805.1-201ENST00000391389 531 ntBASIC14.04□□□□□ -0.16
COL27A1Q8IZC6 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL27A1Q8IZC6 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL27A1Q8IZC6 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC14.04□□□□□ -0.16
COL27A1Q8IZC6 DNAJB1P1-201ENST00000429417 1024 ntBASIC14.04□□□□□ -0.16
COL27A1Q8IZC6 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC14.04□□□□□ -0.16
COL27A1Q8IZC6 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC14.04□□□□□ -0.16
COL27A1Q8IZC6 ST13P19-201ENST00000442505 1124 ntBASIC14.04□□□□□ -0.16
COL27A1Q8IZC6 RN7SL81P-201ENST00000493781 261 ntBASIC14.04□□□□□ -0.16
COL27A1Q8IZC6 AP002803.1-201ENST00000528836 498 ntBASIC14.04□□□□□ -0.16
COL27A1Q8IZC6 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.04□□□□□ -0.16
COL27A1Q8IZC6 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC14.04□□□□□ -0.16
COL27A1Q8IZC6 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
COL27A1Q8IZC6 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
COL27A1Q8IZC6 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14.04□□□□□ -0.16
COL27A1Q8IZC6 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
COL27A1Q8IZC6 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.04□□□□□ -0.16
COL27A1Q8IZC6 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL27A1Q8IZC6 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL27A1Q8IZC6 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL27A1Q8IZC6 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL27A1Q8IZC6 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
COL27A1Q8IZC6 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
COL27A1Q8IZC6 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
COL27A1Q8IZC6 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
COL27A1Q8IZC6 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
COL27A1Q8IZC6 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.04□□□□□ -0.16
COL27A1Q8IZC6 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL27A1Q8IZC6 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC14.04□□□□□ -0.16
COL27A1Q8IZC6 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC14.04□□□□□ -0.16
COL27A1Q8IZC6 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL27A1Q8IZC6 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
COL27A1Q8IZC6 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL27A1Q8IZC6 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
COL27A1Q8IZC6 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL27A1Q8IZC6 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
COL27A1Q8IZC6 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC14.04□□□□□ -0.16
COL27A1Q8IZC6 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC14.04□□□□□ -0.16
COL27A1Q8IZC6 AC027237.1-201ENST00000560942 655 ntBASIC14.04□□□□□ -0.16
COL27A1Q8IZC6 AC009884.2-201ENST00000603110 324 ntBASIC14.04□□□□□ -0.16
COL27A1Q8IZC6 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.04□□□□□ -0.16
COL27A1Q8IZC6 AC027601.3-201ENST00000622907 509 ntBASIC14.04□□□□□ -0.16
COL27A1Q8IZC6 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
COL27A1Q8IZC6 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.03□□□□□ -0.16
COL27A1Q8IZC6 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL27A1Q8IZC6 AC020658.6-201ENST00000623564 1870 ntBASIC14.03□□□□□ -0.16
COL27A1Q8IZC6 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.03□□□□□ -0.16
COL27A1Q8IZC6 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL27A1Q8IZC6 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.03□□□□□ -0.16
COL27A1Q8IZC6 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL27A1Q8IZC6 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC14.03□□□□□ -0.16
COL27A1Q8IZC6 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.03□□□□□ -0.16
COL27A1Q8IZC6 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
COL27A1Q8IZC6 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.03□□□□□ -0.16
COL27A1Q8IZC6 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
COL27A1Q8IZC6 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL27A1Q8IZC6 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL27A1Q8IZC6 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL27A1Q8IZC6 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
COL27A1Q8IZC6 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC14.03□□□□□ -0.16
COL27A1Q8IZC6 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
COL27A1Q8IZC6 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL27A1Q8IZC6 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
COL27A1Q8IZC6 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC14.03□□□□□ -0.16
COL27A1Q8IZC6 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC14.03□□□□□ -0.16
COL27A1Q8IZC6 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
COL27A1Q8IZC6 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC14.03□□□□□ -0.16
COL27A1Q8IZC6 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC14.03□□□□□ -0.16
COL27A1Q8IZC6 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC14.03□□□□□ -0.16
COL27A1Q8IZC6 NEU3-207ENST00000534628 746 ntTSL 2 BASIC14.03□□□□□ -0.16
COL27A1Q8IZC6 MIR4649-201ENST00000582839 64 ntBASIC14.03□□□□□ -0.16
COL27A1Q8IZC6 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC14.03□□□□□ -0.16
COL27A1Q8IZC6 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.03□□□□□ -0.16
COL27A1Q8IZC6 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL27A1Q8IZC6 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
COL27A1Q8IZC6 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL27A1Q8IZC6 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms