Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC60Q8IWA6 AL354989.2-201ENST00000435838 1540 ntBASIC16.97■□□□□ 0.31
CCDC60Q8IWA6 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC60Q8IWA6 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC60Q8IWA6 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC60Q8IWA6 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC60Q8IWA6 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
CCDC60Q8IWA6 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC60Q8IWA6 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC60Q8IWA6 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC60Q8IWA6 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC60Q8IWA6 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC16.97■□□□□ 0.31
CCDC60Q8IWA6 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC16.97■□□□□ 0.31
CCDC60Q8IWA6 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC16.97■□□□□ 0.31
CCDC60Q8IWA6 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC60Q8IWA6 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC60Q8IWA6 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC60Q8IWA6 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC60Q8IWA6 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC60Q8IWA6 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC60Q8IWA6 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CCDC60Q8IWA6 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC60Q8IWA6 AL137783.1-201ENST00000623494 1896 ntBASIC16.97■□□□□ 0.31
CCDC60Q8IWA6 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC60Q8IWA6 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC60Q8IWA6 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC60Q8IWA6 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CCDC60Q8IWA6 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC60Q8IWA6 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC60Q8IWA6 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC60Q8IWA6 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC60Q8IWA6 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CCDC60Q8IWA6 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC60Q8IWA6 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC60Q8IWA6 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC60Q8IWA6 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC60Q8IWA6 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC60Q8IWA6 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC60Q8IWA6 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC60Q8IWA6 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC60Q8IWA6 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC60Q8IWA6 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CCDC60Q8IWA6 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC60Q8IWA6 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC60Q8IWA6 AC105917.1-201ENST00000506637 2539 ntBASIC16.96■□□□□ 0.31
CCDC60Q8IWA6 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CCDC60Q8IWA6 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC16.96■□□□□ 0.31
CCDC60Q8IWA6 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CCDC60Q8IWA6 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.96■□□□□ 0.31
CCDC60Q8IWA6 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC60Q8IWA6 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC16.96■□□□□ 0.31
CCDC60Q8IWA6 AC026434.2-201ENST00000506094 1078 ntBASIC16.96■□□□□ 0.31
CCDC60Q8IWA6 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC16.96■□□□□ 0.31
CCDC60Q8IWA6 AP003171.2-201ENST00000528208 925 ntBASIC16.96■□□□□ 0.31
CCDC60Q8IWA6 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC60Q8IWA6 RN7SL560P-201ENST00000577943 264 ntBASIC16.96■□□□□ 0.31
CCDC60Q8IWA6 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC60Q8IWA6 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC60Q8IWA6 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC60Q8IWA6 AL603764.1-201ENST00000636452 321 ntBASIC16.96■□□□□ 0.31
CCDC60Q8IWA6 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC60Q8IWA6 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CCDC60Q8IWA6 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC60Q8IWA6 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC60Q8IWA6 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC60Q8IWA6 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC60Q8IWA6 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC60Q8IWA6 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC60Q8IWA6 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC60Q8IWA6 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC60Q8IWA6 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CCDC60Q8IWA6 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC60Q8IWA6 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC60Q8IWA6 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CCDC60Q8IWA6 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC60Q8IWA6 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
CCDC60Q8IWA6 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CCDC60Q8IWA6 AC126365.1-201ENST00000578585 1514 ntBASIC16.96■□□□□ 0.3
CCDC60Q8IWA6 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
CCDC60Q8IWA6 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC16.96■□□□□ 0.3
CCDC60Q8IWA6 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CCDC60Q8IWA6 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
CCDC60Q8IWA6 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC60Q8IWA6 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.95■□□□□ 0.3
CCDC60Q8IWA6 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC60Q8IWA6 PPT1-215ENST00000641471 2368 ntBASIC16.95■□□□□ 0.3
CCDC60Q8IWA6 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC60Q8IWA6 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CCDC60Q8IWA6 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC60Q8IWA6 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC60Q8IWA6 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC60Q8IWA6 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC60Q8IWA6 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CCDC60Q8IWA6 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC60Q8IWA6 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC60Q8IWA6 APOC3-202ENST00000375345 604 ntTSL 5 BASIC16.95■□□□□ 0.3
CCDC60Q8IWA6 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC60Q8IWA6 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
CCDC60Q8IWA6 C2orf69P2-201ENST00000562032 1123 ntBASIC16.95■□□□□ 0.3
CCDC60Q8IWA6 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms