Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHD1LQ86WJ1 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC18.95■□□□□ 0.62
CHD1LQ86WJ1 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CHD1LQ86WJ1 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHD1LQ86WJ1 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHD1LQ86WJ1 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHD1LQ86WJ1 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHD1LQ86WJ1 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHD1LQ86WJ1 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC18.94■□□□□ 0.62
CHD1LQ86WJ1 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC18.94■□□□□ 0.62
CHD1LQ86WJ1 PES1-204ENST00000402284 2144 ntTSL 5 BASIC18.94■□□□□ 0.62
CHD1LQ86WJ1 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHD1LQ86WJ1 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHD1LQ86WJ1 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CHD1LQ86WJ1 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHD1LQ86WJ1 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
CHD1LQ86WJ1 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHD1LQ86WJ1 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC18.94■□□□□ 0.62
CHD1LQ86WJ1 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHD1LQ86WJ1 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHD1LQ86WJ1 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC18.94■□□□□ 0.62
CHD1LQ86WJ1 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC18.94■□□□□ 0.62
CHD1LQ86WJ1 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.94■□□□□ 0.62
CHD1LQ86WJ1 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC18.94■□□□□ 0.62
CHD1LQ86WJ1 AL512638.1-201ENST00000457493 794 ntBASIC18.94■□□□□ 0.62
CHD1LQ86WJ1 RN7SL399P-201ENST00000471648 279 ntBASIC18.94■□□□□ 0.62
CHD1LQ86WJ1 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC18.94■□□□□ 0.62
CHD1LQ86WJ1 DOC2GP-202ENST00000514950 1163 ntBASIC18.94■□□□□ 0.62
CHD1LQ86WJ1 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.94■□□□□ 0.62
CHD1LQ86WJ1 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.94■□□□□ 0.62
CHD1LQ86WJ1 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC18.94■□□□□ 0.62
CHD1LQ86WJ1 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CHD1LQ86WJ1 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHD1LQ86WJ1 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHD1LQ86WJ1 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CHD1LQ86WJ1 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CHD1LQ86WJ1 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
CHD1LQ86WJ1 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHD1LQ86WJ1 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHD1LQ86WJ1 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC18.93■□□□□ 0.62
CHD1LQ86WJ1 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC18.93■□□□□ 0.62
CHD1LQ86WJ1 GOLGA8DP-202ENST00000341390 2184 ntBASIC18.93■□□□□ 0.62
CHD1LQ86WJ1 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHD1LQ86WJ1 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHD1LQ86WJ1 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC18.93■□□□□ 0.62
CHD1LQ86WJ1 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHD1LQ86WJ1 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHD1LQ86WJ1 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC18.93■□□□□ 0.62
CHD1LQ86WJ1 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CHD1LQ86WJ1 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
CHD1LQ86WJ1 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC18.93■□□□□ 0.62
CHD1LQ86WJ1 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHD1LQ86WJ1 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHD1LQ86WJ1 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHD1LQ86WJ1 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CHD1LQ86WJ1 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHD1LQ86WJ1 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CHD1LQ86WJ1 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHD1LQ86WJ1 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CHD1LQ86WJ1 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHD1LQ86WJ1 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC18.93■□□□□ 0.62
CHD1LQ86WJ1 AL353779.1-201ENST00000434793 351 ntBASIC18.93■□□□□ 0.62
CHD1LQ86WJ1 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC18.93■□□□□ 0.62
CHD1LQ86WJ1 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHD1LQ86WJ1 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.93■□□□□ 0.62
CHD1LQ86WJ1 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHD1LQ86WJ1 RFPL4AP1-201ENST00000530883 850 ntBASIC18.93■□□□□ 0.62
CHD1LQ86WJ1 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.93■□□□□ 0.62
CHD1LQ86WJ1 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC18.93■□□□□ 0.62
CHD1LQ86WJ1 AC036164.1-201ENST00000570544 333 ntBASIC18.93■□□□□ 0.62
CHD1LQ86WJ1 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHD1LQ86WJ1 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
CHD1LQ86WJ1 AC107373.2-201ENST00000607735 490 ntBASIC18.93■□□□□ 0.62
CHD1LQ86WJ1 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CHD1LQ86WJ1 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHD1LQ86WJ1 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC18.93■□□□□ 0.62
CHD1LQ86WJ1 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHD1LQ86WJ1 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHD1LQ86WJ1 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHD1LQ86WJ1 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHD1LQ86WJ1 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC18.93■□□□□ 0.62
CHD1LQ86WJ1 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC18.93■□□□□ 0.62
CHD1LQ86WJ1 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHD1LQ86WJ1 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CHD1LQ86WJ1 AMT-204ENST00000427987 1646 ntTSL 5 BASIC18.92■□□□□ 0.62
CHD1LQ86WJ1 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHD1LQ86WJ1 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHD1LQ86WJ1 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC18.92■□□□□ 0.62
CHD1LQ86WJ1 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC18.92■□□□□ 0.62
CHD1LQ86WJ1 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHD1LQ86WJ1 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHD1LQ86WJ1 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHD1LQ86WJ1 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHD1LQ86WJ1 USP28-214ENST00000545540 3431 ntTSL 2 BASIC18.92■□□□□ 0.62
CHD1LQ86WJ1 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC18.92■□□□□ 0.62
CHD1LQ86WJ1 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC18.92■□□□□ 0.62
CHD1LQ86WJ1 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHD1LQ86WJ1 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHD1LQ86WJ1 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
CHD1LQ86WJ1 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms