Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AC004877.2-201ENST00000623941 599 ntBASIC13.53□□□□□ -0.24
C11orf88Q6PI97 AC010507.1-201ENST00000633895 436 ntBASIC13.53□□□□□ -0.24
C11orf88Q6PI97 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
C11orf88Q6PI97 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC13.53□□□□□ -0.24
C11orf88Q6PI97 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
C11orf88Q6PI97 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
C11orf88Q6PI97 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
C11orf88Q6PI97 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC13.53□□□□□ -0.24
C11orf88Q6PI97 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.53□□□□□ -0.24
C11orf88Q6PI97 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
C11orf88Q6PI97 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
C11orf88Q6PI97 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC13.53□□□□□ -0.24
C11orf88Q6PI97 AC092127.1-201ENST00000567093 3455 ntBASIC13.53□□□□□ -0.24
C11orf88Q6PI97 AC073957.3-201ENST00000609998 6758 ntBASIC13.53□□□□□ -0.24
C11orf88Q6PI97 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
C11orf88Q6PI97 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
C11orf88Q6PI97 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
C11orf88Q6PI97 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
C11orf88Q6PI97 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC13.53□□□□□ -0.24
C11orf88Q6PI97 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
C11orf88Q6PI97 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
C11orf88Q6PI97 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
C11orf88Q6PI97 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.53□□□□□ -0.24
C11orf88Q6PI97 AC041040.2-201ENST00000622926 2899 ntBASIC13.53□□□□□ -0.24
C11orf88Q6PI97 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.53□□□□□ -0.24
C11orf88Q6PI97 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
C11orf88Q6PI97 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.53□□□□□ -0.24
C11orf88Q6PI97 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.52□□□□□ -0.24
C11orf88Q6PI97 AC112693.3-201ENST00000624819 1983 ntBASIC13.52□□□□□ -0.24
C11orf88Q6PI97 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
C11orf88Q6PI97 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
C11orf88Q6PI97 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
C11orf88Q6PI97 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
C11orf88Q6PI97 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
C11orf88Q6PI97 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
C11orf88Q6PI97 AC107918.4-201ENST00000641966 3141 ntBASIC13.52□□□□□ -0.24
C11orf88Q6PI97 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
C11orf88Q6PI97 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.52□□□□□ -0.25
C11orf88Q6PI97 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
C11orf88Q6PI97 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
C11orf88Q6PI97 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
C11orf88Q6PI97 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
C11orf88Q6PI97 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
C11orf88Q6PI97 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.52□□□□□ -0.25
C11orf88Q6PI97 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC13.52□□□□□ -0.25
C11orf88Q6PI97 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC13.52□□□□□ -0.25
C11orf88Q6PI97 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC13.52□□□□□ -0.25
C11orf88Q6PI97 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC13.52□□□□□ -0.25
C11orf88Q6PI97 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC13.52□□□□□ -0.25
C11orf88Q6PI97 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC13.52□□□□□ -0.25
C11orf88Q6PI97 KRT19P2-202ENST00000557173 1012 ntBASIC13.52□□□□□ -0.25
C11orf88Q6PI97 AC018845.2-201ENST00000568326 409 ntBASIC13.52□□□□□ -0.25
C11orf88Q6PI97 BSG-214ENST00000614867 960 ntTSL 3 BASIC13.52□□□□□ -0.25
C11orf88Q6PI97 REXO1L3P-201ENST00000622202 1288 ntBASIC13.52□□□□□ -0.25
C11orf88Q6PI97 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
C11orf88Q6PI97 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
C11orf88Q6PI97 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
C11orf88Q6PI97 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
C11orf88Q6PI97 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
C11orf88Q6PI97 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.52□□□□□ -0.25
C11orf88Q6PI97 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
C11orf88Q6PI97 AC008677.1-201ENST00000519230 1561 ntBASIC13.52□□□□□ -0.25
C11orf88Q6PI97 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
C11orf88Q6PI97 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.52□□□□□ -0.25
C11orf88Q6PI97 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.52□□□□□ -0.25
C11orf88Q6PI97 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
C11orf88Q6PI97 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.52□□□□□ -0.25
C11orf88Q6PI97 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
C11orf88Q6PI97 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.52□□□□□ -0.25
C11orf88Q6PI97 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.52□□□□□ -0.25
C11orf88Q6PI97 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.52□□□□□ -0.25
C11orf88Q6PI97 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
C11orf88Q6PI97 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.25
C11orf88Q6PI97 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
C11orf88Q6PI97 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
C11orf88Q6PI97 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.52□□□□□ -0.25
C11orf88Q6PI97 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
C11orf88Q6PI97 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
C11orf88Q6PI97 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
C11orf88Q6PI97 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
C11orf88Q6PI97 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
C11orf88Q6PI97 CSPG4P11-201ENST00000560634 4910 ntBASIC13.51□□□□□ -0.25
C11orf88Q6PI97 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
C11orf88Q6PI97 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
C11orf88Q6PI97 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.51□□□□□ -0.25
C11orf88Q6PI97 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.51□□□□□ -0.25
C11orf88Q6PI97 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.51□□□□□ -0.25
C11orf88Q6PI97 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
C11orf88Q6PI97 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
C11orf88Q6PI97 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.51□□□□□ -0.25
C11orf88Q6PI97 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
C11orf88Q6PI97 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
C11orf88Q6PI97 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
C11orf88Q6PI97 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
C11orf88Q6PI97 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
C11orf88Q6PI97 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
C11orf88Q6PI97 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.51□□□□□ -0.25
C11orf88Q6PI97 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
C11orf88Q6PI97 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.51□□□□□ -0.25
C11orf88Q6PI97 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms