Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.27■□□□□ 0.2
CNKSR3Q6P9H4 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.27■□□□□ 0.2
CNKSR3Q6P9H4 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CNKSR3Q6P9H4 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.27■□□□□ 0.2
CNKSR3Q6P9H4 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CNKSR3Q6P9H4 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.27■□□□□ 0.2
CNKSR3Q6P9H4 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.27■□□□□ 0.2
CNKSR3Q6P9H4 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CNKSR3Q6P9H4 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.27■□□□□ 0.2
CNKSR3Q6P9H4 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CNKSR3Q6P9H4 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.27■□□□□ 0.2
CNKSR3Q6P9H4 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.27■□□□□ 0.2
CNKSR3Q6P9H4 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CNKSR3Q6P9H4 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CNKSR3Q6P9H4 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.27■□□□□ 0.2
CNKSR3Q6P9H4 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CNKSR3Q6P9H4 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CNKSR3Q6P9H4 RN7SKP230-201ENST00000365642 335 ntBASIC16.27■□□□□ 0.2
CNKSR3Q6P9H4 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC16.27■□□□□ 0.2
CNKSR3Q6P9H4 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CNKSR3Q6P9H4 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CNKSR3Q6P9H4 KLF2P1-201ENST00000447438 1042 ntBASIC16.27■□□□□ 0.2
CNKSR3Q6P9H4 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CNKSR3Q6P9H4 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC16.27■□□□□ 0.2
CNKSR3Q6P9H4 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
CNKSR3Q6P9H4 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC16.27■□□□□ 0.2
CNKSR3Q6P9H4 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CNKSR3Q6P9H4 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC16.27■□□□□ 0.2
CNKSR3Q6P9H4 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.2
CNKSR3Q6P9H4 RN7SL736P-201ENST00000613111 269 ntBASIC16.27■□□□□ 0.2
CNKSR3Q6P9H4 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC16.27■□□□□ 0.2
CNKSR3Q6P9H4 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.27■□□□□ 0.2
CNKSR3Q6P9H4 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CNKSR3Q6P9H4 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CNKSR3Q6P9H4 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.27■□□□□ 0.19
CNKSR3Q6P9H4 AP003680.1-201ENST00000598970 3660 ntBASIC16.27■□□□□ 0.19
CNKSR3Q6P9H4 MBLAC2-202ENST00000514906 1936 ntBASIC16.27■□□□□ 0.19
CNKSR3Q6P9H4 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CNKSR3Q6P9H4 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CNKSR3Q6P9H4 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CNKSR3Q6P9H4 AC006058.4-201ENST00000624016 1670 ntBASIC16.27■□□□□ 0.19
CNKSR3Q6P9H4 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CNKSR3Q6P9H4 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CNKSR3Q6P9H4 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CNKSR3Q6P9H4 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.27■□□□□ 0.19
CNKSR3Q6P9H4 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.27■□□□□ 0.19
CNKSR3Q6P9H4 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.27■□□□□ 0.19
CNKSR3Q6P9H4 FAM90A7P-201ENST00000382628 1395 ntBASIC16.26■□□□□ 0.19
CNKSR3Q6P9H4 FAM90A23P-201ENST00000400136 1395 ntBASIC16.26■□□□□ 0.19
CNKSR3Q6P9H4 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNKSR3Q6P9H4 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNKSR3Q6P9H4 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CNKSR3Q6P9H4 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CNKSR3Q6P9H4 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CNKSR3Q6P9H4 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.26■□□□□ 0.19
CNKSR3Q6P9H4 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNKSR3Q6P9H4 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CNKSR3Q6P9H4 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CNKSR3Q6P9H4 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CNKSR3Q6P9H4 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNKSR3Q6P9H4 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNKSR3Q6P9H4 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNKSR3Q6P9H4 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNKSR3Q6P9H4 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CNKSR3Q6P9H4 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNKSR3Q6P9H4 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNKSR3Q6P9H4 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CNKSR3Q6P9H4 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNKSR3Q6P9H4 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNKSR3Q6P9H4 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CNKSR3Q6P9H4 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CNKSR3Q6P9H4 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CNKSR3Q6P9H4 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNKSR3Q6P9H4 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.26■□□□□ 0.19
CNKSR3Q6P9H4 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CNKSR3Q6P9H4 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC16.26■□□□□ 0.19
CNKSR3Q6P9H4 CCNC-217ENST00000523985 958 ntTSL 2 BASIC16.26■□□□□ 0.19
CNKSR3Q6P9H4 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC16.26■□□□□ 0.19
CNKSR3Q6P9H4 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
CNKSR3Q6P9H4 NEU3-205ENST00000531619 582 ntTSL 5 BASIC16.26■□□□□ 0.19
CNKSR3Q6P9H4 NPM1P43-201ENST00000558669 786 ntBASIC16.26■□□□□ 0.19
CNKSR3Q6P9H4 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CNKSR3Q6P9H4 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC16.26■□□□□ 0.19
CNKSR3Q6P9H4 NAT9-211ENST00000580632 799 ntTSL 3 BASIC16.26■□□□□ 0.19
CNKSR3Q6P9H4 AC009884.2-201ENST00000603110 324 ntBASIC16.26■□□□□ 0.19
CNKSR3Q6P9H4 RPL35-206ENST00000629845 340 ntTSL 5 BASIC16.26■□□□□ 0.19
CNKSR3Q6P9H4 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNKSR3Q6P9H4 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNKSR3Q6P9H4 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNKSR3Q6P9H4 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.26■□□□□ 0.19
CNKSR3Q6P9H4 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.26■□□□□ 0.19
CNKSR3Q6P9H4 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.26■□□□□ 0.19
CNKSR3Q6P9H4 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNKSR3Q6P9H4 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNKSR3Q6P9H4 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNKSR3Q6P9H4 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CNKSR3Q6P9H4 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNKSR3Q6P9H4 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CNKSR3Q6P9H4 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC16.26■□□□□ 0.19
CNKSR3Q6P9H4 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms