Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCDC144NLQ6NUI1 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC12.5□□□□□ -0.41
CCDC144NLQ6NUI1 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC12.5□□□□□ -0.41
CCDC144NLQ6NUI1 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC12.5□□□□□ -0.41
CCDC144NLQ6NUI1 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCDC144NLQ6NUI1 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCDC144NLQ6NUI1 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CCDC144NLQ6NUI1 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CCDC144NLQ6NUI1 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
CCDC144NLQ6NUI1 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCDC144NLQ6NUI1 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCDC144NLQ6NUI1 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC12.5□□□□□ -0.41
CCDC144NLQ6NUI1 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CCDC144NLQ6NUI1 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 C1QBPP1-201ENST00000400117 770 ntBASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 AC026410.3-201ENST00000514280 936 ntBASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 AC120045.2-201ENST00000567334 178 ntBASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 PIGL-212ENST00000581006 554 ntTSL 4 BASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 SPDYE22P-201ENST00000582158 798 ntBASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 AC008494.3-201ENST00000606615 944 ntBASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 MIR8072-201ENST00000614241 80 ntBASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC12.49□□□□□ -0.41
CCDC144NLQ6NUI1 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC144NLQ6NUI1 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC144NLQ6NUI1 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
CCDC144NLQ6NUI1 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC144NLQ6NUI1 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC12.48□□□□□ -0.41
CCDC144NLQ6NUI1 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC144NLQ6NUI1 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC144NLQ6NUI1 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC144NLQ6NUI1 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC144NLQ6NUI1 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC144NLQ6NUI1 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC144NLQ6NUI1 AC136621.1-201ENST00000624017 2304 ntBASIC12.48□□□□□ -0.41
CCDC144NLQ6NUI1 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
CCDC144NLQ6NUI1 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CCDC144NLQ6NUI1 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12.48□□□□□ -0.41
CCDC144NLQ6NUI1 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC12.48□□□□□ -0.41
CCDC144NLQ6NUI1 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC144NLQ6NUI1 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC144NLQ6NUI1 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC12.48□□□□□ -0.41
CCDC144NLQ6NUI1 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC144NLQ6NUI1 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC144NLQ6NUI1 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC144NLQ6NUI1 AL645937.2-201ENST00000396808 931 ntBASIC12.48□□□□□ -0.41
CCDC144NLQ6NUI1 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC144NLQ6NUI1 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC12.48□□□□□ -0.41
CCDC144NLQ6NUI1 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC12.48□□□□□ -0.41
CCDC144NLQ6NUI1 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.48□□□□□ -0.41
CCDC144NLQ6NUI1 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms