Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LPCAT4Q643R3 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LPCAT4Q643R3 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC14.53□□□□□ -0.08
LPCAT4Q643R3 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC14.53□□□□□ -0.08
LPCAT4Q643R3 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LPCAT4Q643R3 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
LPCAT4Q643R3 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
LPCAT4Q643R3 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
LPCAT4Q643R3 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
LPCAT4Q643R3 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
LPCAT4Q643R3 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
LPCAT4Q643R3 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.52□□□□□ -0.08
LPCAT4Q643R3 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
LPCAT4Q643R3 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.52□□□□□ -0.08
LPCAT4Q643R3 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LPCAT4Q643R3 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
LPCAT4Q643R3 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.52□□□□□ -0.08
LPCAT4Q643R3 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC14.52□□□□□ -0.08
LPCAT4Q643R3 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LPCAT4Q643R3 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
LPCAT4Q643R3 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LPCAT4Q643R3 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC14.52□□□□□ -0.08
LPCAT4Q643R3 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LPCAT4Q643R3 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
LPCAT4Q643R3 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LPCAT4Q643R3 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
LPCAT4Q643R3 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
LPCAT4Q643R3 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
LPCAT4Q643R3 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
LPCAT4Q643R3 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.52□□□□□ -0.08
LPCAT4Q643R3 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.52□□□□□ -0.08
LPCAT4Q643R3 AC015909.5-201ENST00000624336 2266 ntBASIC14.52□□□□□ -0.08
LPCAT4Q643R3 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LPCAT4Q643R3 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LPCAT4Q643R3 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
LPCAT4Q643R3 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
LPCAT4Q643R3 GHSR-202ENST00000427970 912 ntBASIC14.52□□□□□ -0.09
LPCAT4Q643R3 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.52□□□□□ -0.09
LPCAT4Q643R3 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.52□□□□□ -0.09
LPCAT4Q643R3 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC14.52□□□□□ -0.09
LPCAT4Q643R3 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.52□□□□□ -0.09
LPCAT4Q643R3 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC14.52□□□□□ -0.09
LPCAT4Q643R3 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
LPCAT4Q643R3 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.52□□□□□ -0.09
LPCAT4Q643R3 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.52□□□□□ -0.09
LPCAT4Q643R3 AL732292.2-201ENST00000609649 430 ntBASIC14.52□□□□□ -0.09
LPCAT4Q643R3 AL355877.3-201ENST00000622820 899 ntBASIC14.52□□□□□ -0.09
LPCAT4Q643R3 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.52□□□□□ -0.09
LPCAT4Q643R3 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.52□□□□□ -0.09
LPCAT4Q643R3 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.52□□□□□ -0.09
LPCAT4Q643R3 AC016397.2-201ENST00000624848 1985 ntBASIC14.52□□□□□ -0.09
LPCAT4Q643R3 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.52□□□□□ -0.09
LPCAT4Q643R3 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
LPCAT4Q643R3 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LPCAT4Q643R3 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LPCAT4Q643R3 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
LPCAT4Q643R3 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LPCAT4Q643R3 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LPCAT4Q643R3 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LPCAT4Q643R3 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
LPCAT4Q643R3 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LPCAT4Q643R3 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LPCAT4Q643R3 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LPCAT4Q643R3 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LPCAT4Q643R3 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
LPCAT4Q643R3 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LPCAT4Q643R3 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LPCAT4Q643R3 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
LPCAT4Q643R3 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LPCAT4Q643R3 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LPCAT4Q643R3 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC14.51□□□□□ -0.09
LPCAT4Q643R3 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
LPCAT4Q643R3 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC14.51□□□□□ -0.09
LPCAT4Q643R3 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LPCAT4Q643R3 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.51□□□□□ -0.09
LPCAT4Q643R3 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LPCAT4Q643R3 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
LPCAT4Q643R3 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
LPCAT4Q643R3 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC14.51□□□□□ -0.09
LPCAT4Q643R3 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LPCAT4Q643R3 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC14.51□□□□□ -0.09
LPCAT4Q643R3 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LPCAT4Q643R3 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.51□□□□□ -0.09
LPCAT4Q643R3 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LPCAT4Q643R3 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LPCAT4Q643R3 AC073621.1-201ENST00000392730 636 ntBASIC14.51□□□□□ -0.09
LPCAT4Q643R3 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC14.51□□□□□ -0.09
LPCAT4Q643R3 IGHV3-65-201ENST00000523210 341 ntBASIC14.51□□□□□ -0.09
LPCAT4Q643R3 ARL16-209ENST00000573715 763 ntTSL 3 BASIC14.51□□□□□ -0.09
LPCAT4Q643R3 ARL16-211ENST00000576135 694 ntTSL 3 BASIC14.51□□□□□ -0.09
LPCAT4Q643R3 AL645728.2-201ENST00000641974 660 ntBASIC14.51□□□□□ -0.09
LPCAT4Q643R3 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
LPCAT4Q643R3 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LPCAT4Q643R3 AL136982.4-201ENST00000437689 1740 ntBASIC14.51□□□□□ -0.09
LPCAT4Q643R3 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.51□□□□□ -0.09
LPCAT4Q643R3 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LPCAT4Q643R3 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
LPCAT4Q643R3 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LPCAT4Q643R3 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LPCAT4Q643R3 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms