Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD4Q5XG99 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD4Q5XG99 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.91□□□□□ -0.02
LYSMD4Q5XG99 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD4Q5XG99 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD4Q5XG99 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD4Q5XG99 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
LYSMD4Q5XG99 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC14.91□□□□□ -0.02
LYSMD4Q5XG99 HNRNPA1P41-201ENST00000397777 928 ntBASIC14.91□□□□□ -0.02
LYSMD4Q5XG99 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.91□□□□□ -0.02
LYSMD4Q5XG99 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.91□□□□□ -0.02
LYSMD4Q5XG99 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD4Q5XG99 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD4Q5XG99 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD4Q5XG99 FAM58BP-201ENST00000439056 645 ntBASIC14.91□□□□□ -0.02
LYSMD4Q5XG99 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
LYSMD4Q5XG99 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD4Q5XG99 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.91□□□□□ -0.02
LYSMD4Q5XG99 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD4Q5XG99 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC14.91□□□□□ -0.02
LYSMD4Q5XG99 AC012044.1-201ENST00000603431 297 ntBASIC14.91□□□□□ -0.02
LYSMD4Q5XG99 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.91□□□□□ -0.02
LYSMD4Q5XG99 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD4Q5XG99 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD4Q5XG99 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD4Q5XG99 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.91□□□□□ -0.02
LYSMD4Q5XG99 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD4Q5XG99 SHC1P1-201ENST00000425230 1745 ntBASIC14.91□□□□□ -0.02
LYSMD4Q5XG99 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.91□□□□□ -0.02
LYSMD4Q5XG99 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD4Q5XG99 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD4Q5XG99 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD4Q5XG99 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD4Q5XG99 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
LYSMD4Q5XG99 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
LYSMD4Q5XG99 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD4Q5XG99 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC14.91□□□□□ -0.02
LYSMD4Q5XG99 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD4Q5XG99 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
LYSMD4Q5XG99 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD4Q5XG99 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD4Q5XG99 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
LYSMD4Q5XG99 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD4Q5XG99 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD4Q5XG99 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.9□□□□□ -0.02
LYSMD4Q5XG99 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD4Q5XG99 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD4Q5XG99 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC14.9□□□□□ -0.02
LYSMD4Q5XG99 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD4Q5XG99 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD4Q5XG99 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.9□□□□□ -0.02
LYSMD4Q5XG99 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD4Q5XG99 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD4Q5XG99 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD4Q5XG99 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
LYSMD4Q5XG99 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD4Q5XG99 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
LYSMD4Q5XG99 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD4Q5XG99 RN7SKP214-201ENST00000364208 315 ntBASIC14.9□□□□□ -0.02
LYSMD4Q5XG99 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.9□□□□□ -0.02
LYSMD4Q5XG99 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD4Q5XG99 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD4Q5XG99 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.9□□□□□ -0.02
LYSMD4Q5XG99 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
LYSMD4Q5XG99 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC14.9□□□□□ -0.02
LYSMD4Q5XG99 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD4Q5XG99 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD4Q5XG99 ISCA2P1-201ENST00000425548 448 ntBASIC14.9□□□□□ -0.02
LYSMD4Q5XG99 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC14.9□□□□□ -0.02
LYSMD4Q5XG99 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.9□□□□□ -0.02
LYSMD4Q5XG99 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.9□□□□□ -0.02
LYSMD4Q5XG99 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC14.9□□□□□ -0.02
LYSMD4Q5XG99 IGLV3-15-201ENST00000518356 244 ntBASIC14.9□□□□□ -0.02
LYSMD4Q5XG99 LY6E-208ENST00000520531 490 ntTSL 2 BASIC14.9□□□□□ -0.02
LYSMD4Q5XG99 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC14.9□□□□□ -0.02
LYSMD4Q5XG99 IQSEC3P1-201ENST00000538799 536 ntBASIC14.9□□□□□ -0.02
LYSMD4Q5XG99 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC14.9□□□□□ -0.02
LYSMD4Q5XG99 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.9□□□□□ -0.02
LYSMD4Q5XG99 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD4Q5XG99 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC14.9□□□□□ -0.02
LYSMD4Q5XG99 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD4Q5XG99 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD4Q5XG99 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
LYSMD4Q5XG99 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD4Q5XG99 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD4Q5XG99 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD4Q5XG99 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD4Q5XG99 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD4Q5XG99 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC14.9□□□□□ -0.02
LYSMD4Q5XG99 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD4Q5XG99 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.9□□□□□ -0.02
LYSMD4Q5XG99 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
LYSMD4Q5XG99 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.9□□□□□ -0.02
LYSMD4Q5XG99 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD4Q5XG99 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC14.89□□□□□ -0.03
LYSMD4Q5XG99 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD4Q5XG99 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.89□□□□□ -0.03
LYSMD4Q5XG99 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD4Q5XG99 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD4Q5XG99 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms