Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC18.2■□□□□ 0.5
PDS5AQ29RF7 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDS5AQ29RF7 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC18.2■□□□□ 0.5
PDS5AQ29RF7 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
PDS5AQ29RF7 AGER-203ENST00000375065 665 ntTSL 2 BASIC18.2■□□□□ 0.5
PDS5AQ29RF7 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PDS5AQ29RF7 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDS5AQ29RF7 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC18.2■□□□□ 0.5
PDS5AQ29RF7 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC18.2■□□□□ 0.5
PDS5AQ29RF7 AC010141.1-201ENST00000411585 623 ntBASIC18.2■□□□□ 0.5
PDS5AQ29RF7 PTPA-218ENST00000435132 618 ntTSL 2 BASIC18.2■□□□□ 0.5
PDS5AQ29RF7 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDS5AQ29RF7 AC100850.1-201ENST00000506768 649 ntBASIC18.2■□□□□ 0.5
PDS5AQ29RF7 MIR3615-201ENST00000581999 87 ntBASIC18.2■□□□□ 0.5
PDS5AQ29RF7 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDS5AQ29RF7 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDS5AQ29RF7 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18.19■□□□□ 0.5
PDS5AQ29RF7 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
PDS5AQ29RF7 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDS5AQ29RF7 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDS5AQ29RF7 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
PDS5AQ29RF7 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDS5AQ29RF7 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDS5AQ29RF7 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDS5AQ29RF7 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDS5AQ29RF7 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC18.19■□□□□ 0.5
PDS5AQ29RF7 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDS5AQ29RF7 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDS5AQ29RF7 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDS5AQ29RF7 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC18.19■□□□□ 0.5
PDS5AQ29RF7 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDS5AQ29RF7 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDS5AQ29RF7 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDS5AQ29RF7 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC18.19■□□□□ 0.5
PDS5AQ29RF7 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDS5AQ29RF7 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDS5AQ29RF7 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDS5AQ29RF7 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDS5AQ29RF7 SMS-201ENST00000379404 1174 ntTSL 3 BASIC18.19■□□□□ 0.5
PDS5AQ29RF7 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
PDS5AQ29RF7 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC18.19■□□□□ 0.5
PDS5AQ29RF7 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC18.19■□□□□ 0.5
PDS5AQ29RF7 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
PDS5AQ29RF7 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC18.19■□□□□ 0.5
PDS5AQ29RF7 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDS5AQ29RF7 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC18.19■□□□□ 0.5
PDS5AQ29RF7 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDS5AQ29RF7 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC18.19■□□□□ 0.5
PDS5AQ29RF7 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
PDS5AQ29RF7 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC18.19■□□□□ 0.5
PDS5AQ29RF7 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC18.18■□□□□ 0.5
PDS5AQ29RF7 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDS5AQ29RF7 AL359258.3-201ENST00000622910 2331 ntBASIC18.18■□□□□ 0.5
PDS5AQ29RF7 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
PDS5AQ29RF7 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC18.18■□□□□ 0.5
PDS5AQ29RF7 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDS5AQ29RF7 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC18.18■□□□□ 0.5
PDS5AQ29RF7 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDS5AQ29RF7 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC18.18■□□□□ 0.5
PDS5AQ29RF7 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDS5AQ29RF7 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDS5AQ29RF7 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDS5AQ29RF7 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
PDS5AQ29RF7 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDS5AQ29RF7 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC18.18■□□□□ 0.5
PDS5AQ29RF7 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
PDS5AQ29RF7 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDS5AQ29RF7 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDS5AQ29RF7 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDS5AQ29RF7 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDS5AQ29RF7 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDS5AQ29RF7 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDS5AQ29RF7 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDS5AQ29RF7 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC18.18■□□□□ 0.5
PDS5AQ29RF7 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC18.18■□□□□ 0.5
PDS5AQ29RF7 AC126915.1-201ENST00000522847 1038 ntBASIC18.18■□□□□ 0.5
PDS5AQ29RF7 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC18.18■□□□□ 0.5
PDS5AQ29RF7 MIR4683-201ENST00000579659 81 ntBASIC18.18■□□□□ 0.5
PDS5AQ29RF7 AC002472.3-201ENST00000640124 621 ntBASIC18.18■□□□□ 0.5
PDS5AQ29RF7 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
PDS5AQ29RF7 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
PDS5AQ29RF7 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDS5AQ29RF7 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC18.17■□□□□ 0.5
PDS5AQ29RF7 AC003102.2-201ENST00000589195 1469 ntBASIC18.17■□□□□ 0.5
PDS5AQ29RF7 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDS5AQ29RF7 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDS5AQ29RF7 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDS5AQ29RF7 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDS5AQ29RF7 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDS5AQ29RF7 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDS5AQ29RF7 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDS5AQ29RF7 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDS5AQ29RF7 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDS5AQ29RF7 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDS5AQ29RF7 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PDS5AQ29RF7 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDS5AQ29RF7 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDS5AQ29RF7 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDS5AQ29RF7 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDS5AQ29RF7 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 216.4 ms