Protein–RNA interactions for Protein: Q03692

COL10A1, Collagen alpha-1(X) chain, humanhuman

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL10A1Q03692 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
COL10A1Q03692 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
COL10A1Q03692 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
COL10A1Q03692 OR2I1P-209ENST00000641730 5365 ntBASIC13.03□□□□□ -0.32
COL10A1Q03692 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
COL10A1Q03692 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
COL10A1Q03692 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
COL10A1Q03692 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
COL10A1Q03692 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
COL10A1Q03692 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.03□□□□□ -0.32
COL10A1Q03692 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
COL10A1Q03692 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
COL10A1Q03692 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.03□□□□□ -0.32
COL10A1Q03692 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
COL10A1Q03692 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
COL10A1Q03692 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
COL10A1Q03692 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.03□□□□□ -0.32
COL10A1Q03692 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC13.03□□□□□ -0.32
COL10A1Q03692 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.03□□□□□ -0.32
COL10A1Q03692 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
COL10A1Q03692 COX20P2-201ENST00000452636 358 ntBASIC13.03□□□□□ -0.32
COL10A1Q03692 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
COL10A1Q03692 DUT-210ENST00000559935 569 ntTSL 3 BASIC13.03□□□□□ -0.32
COL10A1Q03692 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC13.03□□□□□ -0.32
COL10A1Q03692 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
COL10A1Q03692 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.03□□□□□ -0.32
COL10A1Q03692 AC005498.2-205ENST00000593218 784 ntBASIC13.03□□□□□ -0.32
COL10A1Q03692 AC008738.7-201ENST00000609744 511 ntBASIC13.03□□□□□ -0.32
COL10A1Q03692 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.03□□□□□ -0.32
COL10A1Q03692 CICP11-201ENST00000434745 2827 ntBASIC13.03□□□□□ -0.32
COL10A1Q03692 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
COL10A1Q03692 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
COL10A1Q03692 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.03□□□□□ -0.32
COL10A1Q03692 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
COL10A1Q03692 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
COL10A1Q03692 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
COL10A1Q03692 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
COL10A1Q03692 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.03□□□□□ -0.32
COL10A1Q03692 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
COL10A1Q03692 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
COL10A1Q03692 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.03□□□□□ -0.32
COL10A1Q03692 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.03□□□□□ -0.32
COL10A1Q03692 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.03□□□□□ -0.32
COL10A1Q03692 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
COL10A1Q03692 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.03□□□□□ -0.32
COL10A1Q03692 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
COL10A1Q03692 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
COL10A1Q03692 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
COL10A1Q03692 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
COL10A1Q03692 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
COL10A1Q03692 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
COL10A1Q03692 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
COL10A1Q03692 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
COL10A1Q03692 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.02□□□□□ -0.32
COL10A1Q03692 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.02□□□□□ -0.32
COL10A1Q03692 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
COL10A1Q03692 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
COL10A1Q03692 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.02□□□□□ -0.32
COL10A1Q03692 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
COL10A1Q03692 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.02□□□□□ -0.32
COL10A1Q03692 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
COL10A1Q03692 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
COL10A1Q03692 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.02□□□□□ -0.32
COL10A1Q03692 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.02□□□□□ -0.32
COL10A1Q03692 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
COL10A1Q03692 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
COL10A1Q03692 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
COL10A1Q03692 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.02□□□□□ -0.32
COL10A1Q03692 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
COL10A1Q03692 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
COL10A1Q03692 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
COL10A1Q03692 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
COL10A1Q03692 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
COL10A1Q03692 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.02□□□□□ -0.33
COL10A1Q03692 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
COL10A1Q03692 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.02□□□□□ -0.33
COL10A1Q03692 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.02□□□□□ -0.33
COL10A1Q03692 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.02□□□□□ -0.33
COL10A1Q03692 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC13.02□□□□□ -0.33
COL10A1Q03692 SPDYE18-201ENST00000510091 1050 ntBASIC13.02□□□□□ -0.33
COL10A1Q03692 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.02□□□□□ -0.33
COL10A1Q03692 AC092337.1-201ENST00000568699 1129 ntBASIC13.02□□□□□ -0.33
COL10A1Q03692 AC004840.1-201ENST00000636359 365 ntBASIC13.02□□□□□ -0.33
COL10A1Q03692 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
COL10A1Q03692 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.02□□□□□ -0.33
COL10A1Q03692 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
COL10A1Q03692 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.02□□□□□ -0.33
COL10A1Q03692 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
COL10A1Q03692 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
COL10A1Q03692 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
COL10A1Q03692 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
COL10A1Q03692 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
COL10A1Q03692 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
COL10A1Q03692 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.02□□□□□ -0.33
COL10A1Q03692 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
COL10A1Q03692 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
COL10A1Q03692 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
COL10A1Q03692 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
COL10A1Q03692 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
COL10A1Q03692 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms