Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.97■□□□□ 0.47
CNTNAP1P78357 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.97■□□□□ 0.47
CNTNAP1P78357 AL139384.1-201ENST00000612143 3047 ntBASIC17.97■□□□□ 0.47
CNTNAP1P78357 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CNTNAP1P78357 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.97■□□□□ 0.47
CNTNAP1P78357 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CNTNAP1P78357 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNTNAP1P78357 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNTNAP1P78357 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CNTNAP1P78357 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNTNAP1P78357 CICP13-201ENST00000422015 2789 ntBASIC17.96■□□□□ 0.47
CNTNAP1P78357 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNTNAP1P78357 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC17.96■□□□□ 0.47
CNTNAP1P78357 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CNTNAP1P78357 RN7SKP175-201ENST00000408472 289 ntBASIC17.96■□□□□ 0.47
CNTNAP1P78357 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.96■□□□□ 0.47
CNTNAP1P78357 DDX39AP1-201ENST00000445147 1181 ntBASIC17.96■□□□□ 0.47
CNTNAP1P78357 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC17.96■□□□□ 0.47
CNTNAP1P78357 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CNTNAP1P78357 NAT9-211ENST00000580632 799 ntTSL 3 BASIC17.96■□□□□ 0.47
CNTNAP1P78357 RPL17P45-201ENST00000586289 509 ntBASIC17.96■□□□□ 0.47
CNTNAP1P78357 AC007718.1-201ENST00000621078 280 ntBASIC17.96■□□□□ 0.47
CNTNAP1P78357 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNTNAP1P78357 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.96■□□□□ 0.47
CNTNAP1P78357 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNTNAP1P78357 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNTNAP1P78357 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNTNAP1P78357 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CNTNAP1P78357 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CNTNAP1P78357 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNTNAP1P78357 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CNTNAP1P78357 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.96■□□□□ 0.46
CNTNAP1P78357 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CNTNAP1P78357 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CNTNAP1P78357 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNTNAP1P78357 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.95■□□□□ 0.46
CNTNAP1P78357 SLC9A7P1-202ENST00000556476 2239 ntBASIC17.95■□□□□ 0.46
CNTNAP1P78357 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNTNAP1P78357 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CNTNAP1P78357 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CNTNAP1P78357 AL360270.3-201ENST00000609118 1348 ntBASIC17.95■□□□□ 0.46
CNTNAP1P78357 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNTNAP1P78357 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC17.95■□□□□ 0.46
CNTNAP1P78357 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC17.95■□□□□ 0.46
CNTNAP1P78357 RCC2P8-201ENST00000502779 1035 ntBASIC17.95■□□□□ 0.46
CNTNAP1P78357 TPM1-223ENST00000560445 485 ntTSL 3 BASIC17.95■□□□□ 0.46
CNTNAP1P78357 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC17.95■□□□□ 0.46
CNTNAP1P78357 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC17.95■□□□□ 0.46
CNTNAP1P78357 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC17.95■□□□□ 0.46
CNTNAP1P78357 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
CNTNAP1P78357 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNTNAP1P78357 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.95■□□□□ 0.46
CNTNAP1P78357 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CNTNAP1P78357 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC17.95■□□□□ 0.46
CNTNAP1P78357 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNTNAP1P78357 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNTNAP1P78357 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNTNAP1P78357 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CNTNAP1P78357 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNTNAP1P78357 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CNTNAP1P78357 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.95■□□□□ 0.46
CNTNAP1P78357 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CNTNAP1P78357 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNTNAP1P78357 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNTNAP1P78357 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNTNAP1P78357 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNTNAP1P78357 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNTNAP1P78357 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC17.95■□□□□ 0.46
CNTNAP1P78357 INE2-201ENST00000630399 1874 ntBASIC17.95■□□□□ 0.46
CNTNAP1P78357 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.94■□□□□ 0.46
CNTNAP1P78357 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CNTNAP1P78357 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CNTNAP1P78357 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNTNAP1P78357 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNTNAP1P78357 FKBP4P6-201ENST00000457486 1332 ntBASIC17.94■□□□□ 0.46
CNTNAP1P78357 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNTNAP1P78357 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CNTNAP1P78357 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CNTNAP1P78357 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC17.94■□□□□ 0.46
CNTNAP1P78357 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC17.94■□□□□ 0.46
CNTNAP1P78357 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CNTNAP1P78357 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CNTNAP1P78357 GHSR-202ENST00000427970 912 ntBASIC17.94■□□□□ 0.46
CNTNAP1P78357 FAM86KP-201ENST00000509817 987 ntBASIC17.94■□□□□ 0.46
CNTNAP1P78357 ALG1L6P-201ENST00000515248 758 ntBASIC17.94■□□□□ 0.46
CNTNAP1P78357 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC17.94■□□□□ 0.46
CNTNAP1P78357 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC17.94■□□□□ 0.46
CNTNAP1P78357 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CNTNAP1P78357 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC17.94■□□□□ 0.46
CNTNAP1P78357 AC009955.4-201ENST00000597192 544 ntBASIC17.94■□□□□ 0.46
CNTNAP1P78357 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC17.94■□□□□ 0.46
CNTNAP1P78357 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNTNAP1P78357 AL162426.1-201ENST00000624141 743 ntBASIC17.94■□□□□ 0.46
CNTNAP1P78357 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.94■□□□□ 0.46
CNTNAP1P78357 AC009093.2-202ENST00000620513 2079 ntBASIC17.94■□□□□ 0.46
CNTNAP1P78357 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC17.94■□□□□ 0.46
CNTNAP1P78357 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNTNAP1P78357 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNTNAP1P78357 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CNTNAP1P78357 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms