Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ATP1B3P54709 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ATP1B3P54709 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ATP1B3P54709 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.4□□□□□ -0.26
ATP1B3P54709 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
ATP1B3P54709 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATP1B3P54709 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATP1B3P54709 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.4□□□□□ -0.26
ATP1B3P54709 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
ATP1B3P54709 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATP1B3P54709 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATP1B3P54709 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATP1B3P54709 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATP1B3P54709 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATP1B3P54709 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC13.4□□□□□ -0.26
ATP1B3P54709 RPSAP43-201ENST00000402237 625 ntBASIC13.4□□□□□ -0.26
ATP1B3P54709 UPF3AP3-201ENST00000420996 769 ntBASIC13.4□□□□□ -0.26
ATP1B3P54709 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.4□□□□□ -0.26
ATP1B3P54709 HIST3H2BA-201ENST00000436555 524 ntBASIC13.4□□□□□ -0.26
ATP1B3P54709 SERBP1P3-201ENST00000459980 809 ntBASIC13.4□□□□□ -0.26
ATP1B3P54709 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC13.4□□□□□ -0.26
ATP1B3P54709 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.4□□□□□ -0.26
ATP1B3P54709 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC13.4□□□□□ -0.26
ATP1B3P54709 AL079307.3-201ENST00000556114 283 ntBASIC13.4□□□□□ -0.26
ATP1B3P54709 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
ATP1B3P54709 MIR4453-201ENST00000584019 89 ntBASIC13.4□□□□□ -0.26
ATP1B3P54709 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.4□□□□□ -0.26
ATP1B3P54709 AL589739.1-201ENST00000607720 493 ntBASIC13.4□□□□□ -0.26
ATP1B3P54709 AP001059.3-201ENST00000619053 235 ntBASIC13.4□□□□□ -0.26
ATP1B3P54709 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
ATP1B3P54709 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.4□□□□□ -0.26
ATP1B3P54709 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.4□□□□□ -0.26
ATP1B3P54709 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.4□□□□□ -0.26
ATP1B3P54709 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
ATP1B3P54709 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATP1B3P54709 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
ATP1B3P54709 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.4□□□□□ -0.26
ATP1B3P54709 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.4□□□□□ -0.26
ATP1B3P54709 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.4□□□□□ -0.26
ATP1B3P54709 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATP1B3P54709 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATP1B3P54709 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATP1B3P54709 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATP1B3P54709 AC084364.1-201ENST00000551967 1556 ntBASIC13.4□□□□□ -0.26
ATP1B3P54709 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATP1B3P54709 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ATP1B3P54709 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
ATP1B3P54709 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATP1B3P54709 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
ATP1B3P54709 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
ATP1B3P54709 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.4□□□□□ -0.26
ATP1B3P54709 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.4□□□□□ -0.26
ATP1B3P54709 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ATP1B3P54709 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATP1B3P54709 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
ATP1B3P54709 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
ATP1B3P54709 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.4□□□□□ -0.27
ATP1B3P54709 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ATP1B3P54709 CETN4P-206ENST00000642099 2168 ntBASIC13.39□□□□□ -0.27
ATP1B3P54709 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
ATP1B3P54709 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
ATP1B3P54709 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
ATP1B3P54709 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.39□□□□□ -0.27
ATP1B3P54709 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.39□□□□□ -0.27
ATP1B3P54709 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ATP1B3P54709 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ATP1B3P54709 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ATP1B3P54709 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ATP1B3P54709 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.39□□□□□ -0.27
ATP1B3P54709 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ATP1B3P54709 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
ATP1B3P54709 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
ATP1B3P54709 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.39□□□□□ -0.27
ATP1B3P54709 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ATP1B3P54709 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ATP1B3P54709 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ATP1B3P54709 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ATP1B3P54709 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ATP1B3P54709 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
ATP1B3P54709 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ATP1B3P54709 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ATP1B3P54709 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ATP1B3P54709 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
ATP1B3P54709 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC13.39□□□□□ -0.27
ATP1B3P54709 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC13.39□□□□□ -0.27
ATP1B3P54709 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ATP1B3P54709 TARDBPP1-201ENST00000442013 1203 ntBASIC13.39□□□□□ -0.27
ATP1B3P54709 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.39□□□□□ -0.27
ATP1B3P54709 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC13.39□□□□□ -0.27
ATP1B3P54709 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.39□□□□□ -0.27
ATP1B3P54709 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.39□□□□□ -0.27
ATP1B3P54709 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.39□□□□□ -0.27
ATP1B3P54709 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.39□□□□□ -0.27
ATP1B3P54709 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
ATP1B3P54709 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.39□□□□□ -0.27
ATP1B3P54709 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC13.39□□□□□ -0.27
ATP1B3P54709 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.39□□□□□ -0.27
ATP1B3P54709 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.39□□□□□ -0.27
ATP1B3P54709 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
ATP1B3P54709 WASH3P-207ENST00000560956 1394 ntBASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms