Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
ZNF140P52738 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF140P52738 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
ZNF140P52738 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF140P52738 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.23■□□□□ 0.03
ZNF140P52738 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.23■□□□□ 0.03
ZNF140P52738 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.23■□□□□ 0.03
ZNF140P52738 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF140P52738 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.23■□□□□ 0.03
ZNF140P52738 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.23■□□□□ 0.03
ZNF140P52738 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.23■□□□□ 0.03
ZNF140P52738 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.23■□□□□ 0.03
ZNF140P52738 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF140P52738 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.23■□□□□ 0.03
ZNF140P52738 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
ZNF140P52738 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.23■□□□□ 0.03
ZNF140P52738 RPSAP52-203ENST00000622976 1023 ntBASIC15.23■□□□□ 0.03
ZNF140P52738 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF140P52738 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF140P52738 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF140P52738 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.23■□□□□ 0.03
ZNF140P52738 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF140P52738 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
ZNF140P52738 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.23■□□□□ 0.03
ZNF140P52738 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF140P52738 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.23■□□□□ 0.03
ZNF140P52738 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
ZNF140P52738 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF140P52738 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.23■□□□□ 0.03
ZNF140P52738 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
ZNF140P52738 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF140P52738 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
ZNF140P52738 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF140P52738 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.22■□□□□ 0.03
ZNF140P52738 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF140P52738 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF140P52738 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.22■□□□□ 0.03
ZNF140P52738 KLF2P2-201ENST00000416807 1039 ntBASIC15.22■□□□□ 0.03
ZNF140P52738 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.22■□□□□ 0.03
ZNF140P52738 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.22■□□□□ 0.03
ZNF140P52738 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF140P52738 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF140P52738 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.22■□□□□ 0.03
ZNF140P52738 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.22■□□□□ 0.03
ZNF140P52738 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.22■□□□□ 0.03
ZNF140P52738 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.22■□□□□ 0.03
ZNF140P52738 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.22■□□□□ 0.03
ZNF140P52738 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.22■□□□□ 0.03
ZNF140P52738 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF140P52738 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
ZNF140P52738 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.22■□□□□ 0.03
ZNF140P52738 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF140P52738 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF140P52738 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
ZNF140P52738 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.22■□□□□ 0.03
ZNF140P52738 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF140P52738 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF140P52738 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
ZNF140P52738 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF140P52738 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.22■□□□□ 0.03
ZNF140P52738 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF140P52738 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF140P52738 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.22■□□□□ 0.03
ZNF140P52738 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
ZNF140P52738 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF140P52738 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.22■□□□□ 0.03
ZNF140P52738 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.22■□□□□ 0.03
ZNF140P52738 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
ZNF140P52738 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF140P52738 FER1L4-210ENST00000615531 5998 ntBASIC15.21■□□□□ 0.03
ZNF140P52738 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.21■□□□□ 0.03
ZNF140P52738 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
ZNF140P52738 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF140P52738 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF140P52738 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
ZNF140P52738 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
ZNF140P52738 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF140P52738 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.21■□□□□ 0.03
ZNF140P52738 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF140P52738 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF140P52738 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
ZNF140P52738 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.21■□□□□ 0.03
ZNF140P52738 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF140P52738 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.21■□□□□ 0.03
ZNF140P52738 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.21■□□□□ 0.03
ZNF140P52738 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.21■□□□□ 0.03
ZNF140P52738 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.21■□□□□ 0.03
ZNF140P52738 AP001063.1-201ENST00000568332 529 ntBASIC15.21■□□□□ 0.03
ZNF140P52738 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
ZNF140P52738 AP005019.2-201ENST00000615104 511 ntBASIC15.21■□□□□ 0.03
ZNF140P52738 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.21■□□□□ 0.03
ZNF140P52738 AL033527.5-201ENST00000641382 801 ntBASIC15.21■□□□□ 0.03
ZNF140P52738 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF140P52738 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF140P52738 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
ZNF140P52738 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF140P52738 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF140P52738 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF140P52738 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.21■□□□□ 0.03
ZNF140P52738 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms