Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLCN4P51793 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLCN4P51793 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.04■□□□□ 0.16
CLCN4P51793 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLCN4P51793 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CLCN4P51793 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.04■□□□□ 0.16
CLCN4P51793 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLCN4P51793 AP005117.1-202ENST00000581724 1908 ntBASIC16.04■□□□□ 0.16
CLCN4P51793 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.03■□□□□ 0.16
CLCN4P51793 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLCN4P51793 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CLCN4P51793 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLCN4P51793 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLCN4P51793 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.03■□□□□ 0.16
CLCN4P51793 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLCN4P51793 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CLCN4P51793 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLCN4P51793 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.03■□□□□ 0.16
CLCN4P51793 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.03■□□□□ 0.16
CLCN4P51793 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLCN4P51793 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLCN4P51793 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
CLCN4P51793 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
CLCN4P51793 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC16.03■□□□□ 0.16
CLCN4P51793 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CLCN4P51793 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLCN4P51793 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLCN4P51793 IMP3P2-201ENST00000489760 475 ntBASIC16.03■□□□□ 0.16
CLCN4P51793 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC16.03■□□□□ 0.16
CLCN4P51793 SDHD-202ENST00000525291 790 ntTSL 3 BASIC16.03■□□□□ 0.16
CLCN4P51793 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CLCN4P51793 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC16.03■□□□□ 0.16
CLCN4P51793 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC16.03■□□□□ 0.16
CLCN4P51793 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC16.03■□□□□ 0.16
CLCN4P51793 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC16.03■□□□□ 0.16
CLCN4P51793 AP001505.2-201ENST00000616815 443 ntBASIC16.03■□□□□ 0.16
CLCN4P51793 AC138466.3-201ENST00000619983 221 ntBASIC16.03■□□□□ 0.16
CLCN4P51793 AC091812.3-201ENST00000621362 345 ntBASIC16.03■□□□□ 0.16
CLCN4P51793 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLCN4P51793 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLCN4P51793 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
CLCN4P51793 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.03■□□□□ 0.16
CLCN4P51793 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLCN4P51793 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLCN4P51793 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLCN4P51793 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLCN4P51793 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CLCN4P51793 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLCN4P51793 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.03■□□□□ 0.16
CLCN4P51793 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLCN4P51793 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLCN4P51793 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLCN4P51793 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.02■□□□□ 0.16
CLCN4P51793 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLCN4P51793 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLCN4P51793 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CLCN4P51793 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CLCN4P51793 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLCN4P51793 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLCN4P51793 CLUHP2-201ENST00000426660 1303 ntBASIC16.02■□□□□ 0.16
CLCN4P51793 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC16.02■□□□□ 0.16
CLCN4P51793 TUBBP5-203ENST00000508529 1334 ntBASIC16.02■□□□□ 0.16
CLCN4P51793 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CLCN4P51793 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
CLCN4P51793 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CLCN4P51793 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CLCN4P51793 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLCN4P51793 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CLCN4P51793 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CLCN4P51793 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CLCN4P51793 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CLCN4P51793 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC16.02■□□□□ 0.16
CLCN4P51793 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC16.02■□□□□ 0.16
CLCN4P51793 FTLP10-202ENST00000505798 471 ntBASIC16.02■□□□□ 0.16
CLCN4P51793 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.02■□□□□ 0.16
CLCN4P51793 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC16.02■□□□□ 0.16
CLCN4P51793 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC16.02■□□□□ 0.16
CLCN4P51793 AC022748.3-201ENST00000621828 275 ntBASIC16.02■□□□□ 0.16
CLCN4P51793 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC16.02■□□□□ 0.16
CLCN4P51793 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.02■□□□□ 0.15
CLCN4P51793 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.02■□□□□ 0.15
CLCN4P51793 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CLCN4P51793 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLCN4P51793 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLCN4P51793 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLCN4P51793 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
CLCN4P51793 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
CLCN4P51793 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CLCN4P51793 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.15
CLCN4P51793 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
CLCN4P51793 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CLCN4P51793 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLCN4P51793 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.01■□□□□ 0.15
CLCN4P51793 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLCN4P51793 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLCN4P51793 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLCN4P51793 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLCN4P51793 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CLCN4P51793 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLCN4P51793 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms