Protein–RNA interactions for Protein: P49768

PSEN1, Presenilin-1, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1P49768 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PSEN1P49768 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PSEN1P49768 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PSEN1P49768 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PSEN1P49768 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PSEN1P49768 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PSEN1P49768 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PSEN1P49768 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PSEN1P49768 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.53■□□□□ 0.24
PSEN1P49768 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PSEN1P49768 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
PSEN1P49768 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.53■□□□□ 0.24
PSEN1P49768 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.53■□□□□ 0.24
PSEN1P49768 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.53■□□□□ 0.24
PSEN1P49768 MTCYBP32-201ENST00000427945 1084 ntBASIC16.53■□□□□ 0.24
PSEN1P49768 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.53■□□□□ 0.24
PSEN1P49768 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.53■□□□□ 0.24
PSEN1P49768 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.53■□□□□ 0.24
PSEN1P49768 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PSEN1P49768 AL589987.1-201ENST00000453380 819 ntBASIC16.53■□□□□ 0.24
PSEN1P49768 AL022319.1-201ENST00000458183 1167 ntBASIC16.53■□□□□ 0.24
PSEN1P49768 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.53■□□□□ 0.24
PSEN1P49768 AC025580.1-201ENST00000559553 729 ntTSL 5 BASIC16.53■□□□□ 0.24
PSEN1P49768 AC023968.2-201ENST00000560593 1049 ntBASIC16.53■□□□□ 0.24
PSEN1P49768 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.53■□□□□ 0.24
PSEN1P49768 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.53■□□□□ 0.24
PSEN1P49768 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.53■□□□□ 0.24
PSEN1P49768 AC092574.1-201ENST00000609771 420 ntBASIC16.53■□□□□ 0.24
PSEN1P49768 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.53■□□□□ 0.24
PSEN1P49768 AC016597.2-201ENST00000613256 341 ntBASIC16.53■□□□□ 0.24
PSEN1P49768 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.53■□□□□ 0.24
PSEN1P49768 AC069503.1-202ENST00000616576 642 ntBASIC16.53■□□□□ 0.24
PSEN1P49768 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PSEN1P49768 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
PSEN1P49768 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC16.53■□□□□ 0.24
PSEN1P49768 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.53■□□□□ 0.24
PSEN1P49768 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.53■□□□□ 0.24
PSEN1P49768 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PSEN1P49768 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.53■□□□□ 0.24
PSEN1P49768 AC138969.3-201ENST00000546612 1459 ntBASIC16.53■□□□□ 0.24
PSEN1P49768 AC138932.2-201ENST00000548268 1459 ntBASIC16.53■□□□□ 0.24
PSEN1P49768 AC126755.4-201ENST00000549796 1459 ntBASIC16.53■□□□□ 0.24
PSEN1P49768 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.53■□□□□ 0.24
PSEN1P49768 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PSEN1P49768 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.53■□□□□ 0.24
PSEN1P49768 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
PSEN1P49768 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PSEN1P49768 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC16.53■□□□□ 0.24
PSEN1P49768 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PSEN1P49768 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.53■□□□□ 0.24
PSEN1P49768 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PSEN1P49768 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PSEN1P49768 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PSEN1P49768 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PSEN1P49768 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
PSEN1P49768 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
PSEN1P49768 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PSEN1P49768 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.52■□□□□ 0.24
PSEN1P49768 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.52■□□□□ 0.24
PSEN1P49768 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PSEN1P49768 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
PSEN1P49768 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PSEN1P49768 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PSEN1P49768 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PSEN1P49768 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PSEN1P49768 AC006480.2-201ENST00000609770 1337 ntBASIC16.52■□□□□ 0.24
PSEN1P49768 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PSEN1P49768 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
PSEN1P49768 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PSEN1P49768 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.52■□□□□ 0.24
PSEN1P49768 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PSEN1P49768 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.52■□□□□ 0.24
PSEN1P49768 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC16.52■□□□□ 0.24
PSEN1P49768 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.52■□□□□ 0.24
PSEN1P49768 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC16.52■□□□□ 0.24
PSEN1P49768 LYRM2-204ENST00000520441 791 ntTSL 3 BASIC16.52■□□□□ 0.24
PSEN1P49768 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
PSEN1P49768 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.52■□□□□ 0.24
PSEN1P49768 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.52■□□□□ 0.24
PSEN1P49768 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.52■□□□□ 0.24
PSEN1P49768 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
PSEN1P49768 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.52■□□□□ 0.24
PSEN1P49768 AC105430.1-202ENST00000567477 483 ntTSL 3 BASIC16.52■□□□□ 0.24
PSEN1P49768 AC024267.5-201ENST00000579154 599 ntBASIC16.52■□□□□ 0.24
PSEN1P49768 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.52■□□□□ 0.24
PSEN1P49768 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.52■□□□□ 0.24
PSEN1P49768 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.52■□□□□ 0.24
PSEN1P49768 AC025048.6-201ENST00000634326 1161 ntBASIC16.52■□□□□ 0.24
PSEN1P49768 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.52■□□□□ 0.24
PSEN1P49768 AF228730.6-201ENST00000641497 218 ntBASIC16.52■□□□□ 0.24
PSEN1P49768 AC084121.3-201ENST00000641716 218 ntBASIC16.52■□□□□ 0.24
PSEN1P49768 AC105233.6-201ENST00000642093 218 ntBASIC16.52■□□□□ 0.24
PSEN1P49768 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PSEN1P49768 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PSEN1P49768 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.52■□□□□ 0.23
PSEN1P49768 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PSEN1P49768 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PSEN1P49768 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.23
PSEN1P49768 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PSEN1P49768 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms