Protein–RNA interactions for Protein: P48382

RFX5, DNA-binding protein RFX5, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX5P48382 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RFX5P48382 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RFX5P48382 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RFX5P48382 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
RFX5P48382 AC023157.3-201ENST00000619086 2088 ntBASIC18.64■□□□□ 0.57
RFX5P48382 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RFX5P48382 MIR326-201ENST00000362220 95 ntBASIC18.64■□□□□ 0.57
RFX5P48382 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC18.64■□□□□ 0.57
RFX5P48382 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC18.64■□□□□ 0.57
RFX5P48382 RPSAP36-202ENST00000494591 1261 ntBASIC18.64■□□□□ 0.57
RFX5P48382 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RFX5P48382 RIT1-205ENST00000539040 919 ntTSL 2 BASIC18.64■□□□□ 0.57
RFX5P48382 PPY2P-201ENST00000582808 702 ntBASIC18.64■□□□□ 0.57
RFX5P48382 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RFX5P48382 KLK3-211ENST00000597483 810 ntTSL 2 BASIC18.64■□□□□ 0.57
RFX5P48382 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC18.64■□□□□ 0.57
RFX5P48382 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFX5P48382 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFX5P48382 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
RFX5P48382 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFX5P48382 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFX5P48382 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC18.64■□□□□ 0.57
RFX5P48382 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFX5P48382 AC003102.2-201ENST00000589195 1469 ntBASIC18.64■□□□□ 0.57
RFX5P48382 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFX5P48382 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFX5P48382 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC18.63■□□□□ 0.57
RFX5P48382 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC18.63■□□□□ 0.57
RFX5P48382 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC18.63■□□□□ 0.57
RFX5P48382 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RFX5P48382 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.63■□□□□ 0.57
RFX5P48382 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFX5P48382 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFX5P48382 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFX5P48382 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RFX5P48382 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RFX5P48382 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFX5P48382 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
RFX5P48382 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFX5P48382 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFX5P48382 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFX5P48382 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFX5P48382 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
RFX5P48382 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RFX5P48382 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC18.63■□□□□ 0.57
RFX5P48382 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RFX5P48382 PACS1-203ENST00000524815 628 ntTSL 4 BASIC18.63■□□□□ 0.57
RFX5P48382 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC18.63■□□□□ 0.57
RFX5P48382 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC18.63■□□□□ 0.57
RFX5P48382 MIR4683-201ENST00000579659 81 ntBASIC18.63■□□□□ 0.57
RFX5P48382 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RFX5P48382 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC18.63■□□□□ 0.57
RFX5P48382 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC18.63■□□□□ 0.57
RFX5P48382 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFX5P48382 MIR6869-201ENST00000619434 62 ntBASIC18.63■□□□□ 0.57
RFX5P48382 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC18.63■□□□□ 0.57
RFX5P48382 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RFX5P48382 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC18.63■□□□□ 0.57
RFX5P48382 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC18.63■□□□□ 0.57
RFX5P48382 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC18.63■□□□□ 0.57
RFX5P48382 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC18.63■□□□□ 0.57
RFX5P48382 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RFX5P48382 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RFX5P48382 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFX5P48382 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC18.63■□□□□ 0.57
RFX5P48382 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RFX5P48382 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.63■□□□□ 0.57
RFX5P48382 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFX5P48382 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFX5P48382 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RFX5P48382 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFX5P48382 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC18.62■□□□□ 0.57
RFX5P48382 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC18.62■□□□□ 0.57
RFX5P48382 AC011270.2-201ENST00000624293 2550 ntBASIC18.62■□□□□ 0.57
RFX5P48382 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.62■□□□□ 0.57
RFX5P48382 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.62■□□□□ 0.57
RFX5P48382 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFX5P48382 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RFX5P48382 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RFX5P48382 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RFX5P48382 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFX5P48382 SERF2-209ENST00000409646 559 ntTSL 4 BASIC18.62■□□□□ 0.57
RFX5P48382 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC18.62■□□□□ 0.57
RFX5P48382 HIST2H2BB-201ENST00000449108 381 ntBASIC18.62■□□□□ 0.57
RFX5P48382 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC18.62■□□□□ 0.57
RFX5P48382 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC18.62■□□□□ 0.57
RFX5P48382 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC18.62■□□□□ 0.57
RFX5P48382 EEF1DP1-201ENST00000585891 896 ntBASIC18.62■□□□□ 0.57
RFX5P48382 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC18.62■□□□□ 0.57
RFX5P48382 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFX5P48382 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFX5P48382 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFX5P48382 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RFX5P48382 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC18.62■□□□□ 0.57
RFX5P48382 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RFX5P48382 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC18.62■□□□□ 0.57
RFX5P48382 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC18.62■□□□□ 0.57
RFX5P48382 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RFX5P48382 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RFX5P48382 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms