Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.26■□□□□ 0.03
HMGCLP35914 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HMGCLP35914 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGCLP35914 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGCLP35914 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGCLP35914 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.26■□□□□ 0.03
HMGCLP35914 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HMGCLP35914 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
HMGCLP35914 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGCLP35914 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.26■□□□□ 0.03
HMGCLP35914 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGCLP35914 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGCLP35914 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HMGCLP35914 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGCLP35914 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGCLP35914 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.25■□□□□ 0.03
HMGCLP35914 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.25■□□□□ 0.03
HMGCLP35914 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.25■□□□□ 0.03
HMGCLP35914 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HMGCLP35914 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGCLP35914 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGCLP35914 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.25■□□□□ 0.03
HMGCLP35914 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.25■□□□□ 0.03
HMGCLP35914 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGCLP35914 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.25■□□□□ 0.03
HMGCLP35914 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HMGCLP35914 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGCLP35914 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGCLP35914 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
HMGCLP35914 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.25■□□□□ 0.03
HMGCLP35914 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGCLP35914 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.25■□□□□ 0.03
HMGCLP35914 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGCLP35914 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
HMGCLP35914 RNU1-114P-201ENST00000365297 166 ntBASIC15.25■□□□□ 0.03
HMGCLP35914 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HMGCLP35914 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
HMGCLP35914 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.25■□□□□ 0.03
HMGCLP35914 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.25■□□□□ 0.03
HMGCLP35914 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.25■□□□□ 0.03
HMGCLP35914 KLF2P2-201ENST00000416807 1039 ntBASIC15.25■□□□□ 0.03
HMGCLP35914 COX5BP8-201ENST00000416911 349 ntBASIC15.25■□□□□ 0.03
HMGCLP35914 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGCLP35914 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.25■□□□□ 0.03
HMGCLP35914 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.25■□□□□ 0.03
HMGCLP35914 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.25■□□□□ 0.03
HMGCLP35914 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.25■□□□□ 0.03
HMGCLP35914 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.25■□□□□ 0.03
HMGCLP35914 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGCLP35914 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HMGCLP35914 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
HMGCLP35914 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGCLP35914 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
HMGCLP35914 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGCLP35914 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
HMGCLP35914 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HMGCLP35914 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGCLP35914 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
HMGCLP35914 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HMGCLP35914 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
HMGCLP35914 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGCLP35914 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.25■□□□□ 0.03
HMGCLP35914 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGCLP35914 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGCLP35914 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGCLP35914 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HMGCLP35914 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HMGCLP35914 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGCLP35914 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
HMGCLP35914 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.25■□□□□ 0.03
HMGCLP35914 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.25■□□□□ 0.03
HMGCLP35914 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HMGCLP35914 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HMGCLP35914 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
HMGCLP35914 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HMGCLP35914 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCLP35914 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCLP35914 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
HMGCLP35914 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
HMGCLP35914 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCLP35914 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
HMGCLP35914 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCLP35914 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.24■□□□□ 0.03
HMGCLP35914 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCLP35914 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCLP35914 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCLP35914 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCLP35914 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCLP35914 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
HMGCLP35914 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCLP35914 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCLP35914 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCLP35914 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCLP35914 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCLP35914 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.24■□□□□ 0.03
HMGCLP35914 ACTBP8-201ENST00000403258 1108 ntBASIC15.24■□□□□ 0.03
HMGCLP35914 NME2P1-201ENST00000426182 414 ntBASIC15.24■□□□□ 0.03
HMGCLP35914 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGCLP35914 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.24■□□□□ 0.03
HMGCLP35914 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms