Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.46■□□□□ 0.39
CNGA1P29973 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CNGA1P29973 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNGA1P29973 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNGA1P29973 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
CNGA1P29973 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CNGA1P29973 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CNGA1P29973 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNGA1P29973 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNGA1P29973 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
CNGA1P29973 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNGA1P29973 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CNGA1P29973 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNGA1P29973 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNGA1P29973 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.45■□□□□ 0.38
CNGA1P29973 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CNGA1P29973 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CNGA1P29973 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNGA1P29973 RNU1-114P-201ENST00000365297 166 ntBASIC17.45■□□□□ 0.38
CNGA1P29973 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CNGA1P29973 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNGA1P29973 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CNGA1P29973 KLF2P2-201ENST00000416807 1039 ntBASIC17.45■□□□□ 0.38
CNGA1P29973 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC17.45■□□□□ 0.38
CNGA1P29973 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC17.45■□□□□ 0.38
CNGA1P29973 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC17.45■□□□□ 0.38
CNGA1P29973 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.45■□□□□ 0.38
CNGA1P29973 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC17.45■□□□□ 0.38
CNGA1P29973 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC17.45■□□□□ 0.38
CNGA1P29973 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNGA1P29973 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNGA1P29973 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.45■□□□□ 0.38
CNGA1P29973 AC018735.1-201ENST00000437208 1502 ntBASIC17.45■□□□□ 0.38
CNGA1P29973 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNGA1P29973 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNGA1P29973 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNGA1P29973 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CNGA1P29973 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CNGA1P29973 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNGA1P29973 LINC00554-201ENST00000564841 3011 ntBASIC17.45■□□□□ 0.38
CNGA1P29973 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.45■□□□□ 0.38
CNGA1P29973 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.45■□□□□ 0.38
CNGA1P29973 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
CNGA1P29973 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC17.44■□□□□ 0.38
CNGA1P29973 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNGA1P29973 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNGA1P29973 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.44■□□□□ 0.38
CNGA1P29973 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNGA1P29973 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNGA1P29973 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNGA1P29973 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC17.44■□□□□ 0.38
CNGA1P29973 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNGA1P29973 PRAL-201ENST00000624952 3286 ntBASIC17.44■□□□□ 0.38
CNGA1P29973 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNGA1P29973 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CNGA1P29973 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNGA1P29973 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CNGA1P29973 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CNGA1P29973 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CNGA1P29973 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC17.44■□□□□ 0.38
CNGA1P29973 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNGA1P29973 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.44■□□□□ 0.38
CNGA1P29973 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC17.44■□□□□ 0.38
CNGA1P29973 HINT2P1-201ENST00000419438 481 ntBASIC17.44■□□□□ 0.38
CNGA1P29973 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC17.44■□□□□ 0.38
CNGA1P29973 CNN2P10-201ENST00000443067 918 ntBASIC17.44■□□□□ 0.38
CNGA1P29973 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
CNGA1P29973 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CNGA1P29973 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC17.44■□□□□ 0.38
CNGA1P29973 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC17.44■□□□□ 0.38
CNGA1P29973 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC17.44■□□□□ 0.38
CNGA1P29973 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNGA1P29973 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC17.44■□□□□ 0.38
CNGA1P29973 NDUFV2P1-201ENST00000596415 907 ntBASIC17.44■□□□□ 0.38
CNGA1P29973 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.44■□□□□ 0.38
CNGA1P29973 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CNGA1P29973 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CNGA1P29973 AP005117.1-202ENST00000581724 1908 ntBASIC17.44■□□□□ 0.38
CNGA1P29973 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CNGA1P29973 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.44■□□□□ 0.38
CNGA1P29973 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CNGA1P29973 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNGA1P29973 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNGA1P29973 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.44■□□□□ 0.38
CNGA1P29973 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.44■□□□□ 0.38
CNGA1P29973 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.44■□□□□ 0.38
CNGA1P29973 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNGA1P29973 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.44■□□□□ 0.38
CNGA1P29973 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.44■□□□□ 0.38
CNGA1P29973 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CNGA1P29973 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNGA1P29973 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNGA1P29973 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNGA1P29973 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNGA1P29973 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CNGA1P29973 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNGA1P29973 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CNGA1P29973 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNGA1P29973 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CNGA1P29973 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms