Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
LMO1P25800 ACE3P-201ENST00000423435 1973 ntBASIC12.91□□□□□ -0.34
LMO1P25800 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LMO1P25800 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LMO1P25800 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
LMO1P25800 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LMO1P25800 C1R-201ENST00000535233 2211 ntTSL 2 BASIC12.91□□□□□ -0.34
LMO1P25800 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LMO1P25800 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LMO1P25800 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LMO1P25800 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LMO1P25800 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LMO1P25800 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC12.91□□□□□ -0.34
LMO1P25800 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC12.91□□□□□ -0.34
LMO1P25800 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC12.91□□□□□ -0.34
LMO1P25800 FTH1-202ENST00000526640 786 ntTSL 2 BASIC12.91□□□□□ -0.34
LMO1P25800 AC135586.1-201ENST00000539323 574 ntBASIC12.91□□□□□ -0.34
LMO1P25800 RARRES2P5-201ENST00000564013 466 ntBASIC12.91□□□□□ -0.34
LMO1P25800 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC12.91□□□□□ -0.34
LMO1P25800 AC008738.7-201ENST00000609744 511 ntBASIC12.91□□□□□ -0.34
LMO1P25800 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LMO1P25800 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.91□□□□□ -0.34
LMO1P25800 AC004840.1-201ENST00000636359 365 ntBASIC12.91□□□□□ -0.34
LMO1P25800 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LMO1P25800 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LMO1P25800 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LMO1P25800 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
LMO1P25800 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
LMO1P25800 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LMO1P25800 UCKL1-AS1-201ENST00000623569 3602 ntBASIC12.91□□□□□ -0.34
LMO1P25800 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LMO1P25800 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC12.91□□□□□ -0.34
LMO1P25800 AC006504.5-208ENST00000588784 2401 ntBASIC12.91□□□□□ -0.34
LMO1P25800 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LMO1P25800 RERG-209ENST00000546331 1383 ntTSL 2 BASIC12.91□□□□□ -0.34
LMO1P25800 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
LMO1P25800 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LMO1P25800 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LMO1P25800 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LMO1P25800 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LMO1P25800 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LMO1P25800 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
LMO1P25800 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
LMO1P25800 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LMO1P25800 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LMO1P25800 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LMO1P25800 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC12.91□□□□□ -0.34
LMO1P25800 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
LMO1P25800 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LMO1P25800 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LMO1P25800 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC12.9□□□□□ -0.34
LMO1P25800 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
LMO1P25800 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LMO1P25800 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LMO1P25800 BEND3P1-201ENST00000421591 1944 ntBASIC12.9□□□□□ -0.34
LMO1P25800 REXO1L4P-201ENST00000605109 1937 ntBASIC12.9□□□□□ -0.34
LMO1P25800 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LMO1P25800 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC12.9□□□□□ -0.34
LMO1P25800 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LMO1P25800 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LMO1P25800 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LMO1P25800 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LMO1P25800 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LMO1P25800 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LMO1P25800 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC12.9□□□□□ -0.34
LMO1P25800 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LMO1P25800 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LMO1P25800 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
LMO1P25800 ARL16-202ENST00000570561 768 ntTSL 2 BASIC12.9□□□□□ -0.34
LMO1P25800 SAMD11P1-201ENST00000571429 661 ntBASIC12.9□□□□□ -0.34
LMO1P25800 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC12.9□□□□□ -0.34
LMO1P25800 GPX4-206ENST00000588919 803 ntTSL 2 BASIC12.9□□□□□ -0.34
LMO1P25800 AL390955.2-201ENST00000603032 514 ntBASIC12.9□□□□□ -0.34
LMO1P25800 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC12.9□□□□□ -0.34
LMO1P25800 AC093512.1-201ENST00000617969 520 ntBASIC12.9□□□□□ -0.34
LMO1P25800 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LMO1P25800 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LMO1P25800 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
LMO1P25800 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LMO1P25800 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC12.9□□□□□ -0.34
LMO1P25800 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC12.9□□□□□ -0.34
LMO1P25800 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LMO1P25800 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
LMO1P25800 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LMO1P25800 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LMO1P25800 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
LMO1P25800 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LMO1P25800 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LMO1P25800 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
LMO1P25800 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LMO1P25800 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
LMO1P25800 AC079781.5-202ENST00000641784 3743 ntBASIC12.9□□□□□ -0.34
LMO1P25800 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.9□□□□□ -0.34
LMO1P25800 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.9□□□□□ -0.34
LMO1P25800 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LMO1P25800 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LMO1P25800 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LMO1P25800 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
LMO1P25800 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
LMO1P25800 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms