Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD53P19397 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CD53P19397 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD53P19397 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD53P19397 AC009090.5-201ENST00000624886 2285 ntBASIC14.04□□□□□ -0.16
CD53P19397 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CD53P19397 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.04□□□□□ -0.16
CD53P19397 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CD53P19397 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.04□□□□□ -0.16
CD53P19397 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD53P19397 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD53P19397 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.04□□□□□ -0.16
CD53P19397 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.04□□□□□ -0.16
CD53P19397 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD53P19397 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CD53P19397 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD53P19397 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD53P19397 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.04□□□□□ -0.16
CD53P19397 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD53P19397 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD53P19397 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD53P19397 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.03□□□□□ -0.16
CD53P19397 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD53P19397 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CD53P19397 AJ011931.1-201ENST00000618749 2492 ntBASIC14.03□□□□□ -0.16
CD53P19397 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD53P19397 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD53P19397 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CD53P19397 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CD53P19397 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD53P19397 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD53P19397 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD53P19397 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.03□□□□□ -0.16
CD53P19397 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.03□□□□□ -0.16
CD53P19397 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CD53P19397 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.03□□□□□ -0.16
CD53P19397 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CD53P19397 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CD53P19397 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CD53P19397 AP006294.1-201ENST00000415407 339 ntBASIC14.03□□□□□ -0.16
CD53P19397 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
CD53P19397 DFFBP1-201ENST00000433250 979 ntBASIC14.03□□□□□ -0.16
CD53P19397 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CD53P19397 GNAQP1-201ENST00000444815 1067 ntBASIC14.03□□□□□ -0.16
CD53P19397 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.03□□□□□ -0.16
CD53P19397 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CD53P19397 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.03□□□□□ -0.16
CD53P19397 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CD53P19397 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.03□□□□□ -0.16
CD53P19397 AC105021.1-202ENST00000570572 669 ntBASIC14.03□□□□□ -0.16
CD53P19397 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.03□□□□□ -0.16
CD53P19397 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.03□□□□□ -0.16
CD53P19397 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD53P19397 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD53P19397 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.03□□□□□ -0.16
CD53P19397 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CD53P19397 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD53P19397 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD53P19397 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CD53P19397 AC073439.1-201ENST00000624121 1774 ntBASIC14.03□□□□□ -0.16
CD53P19397 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD53P19397 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.03□□□□□ -0.16
CD53P19397 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD53P19397 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
CD53P19397 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.03□□□□□ -0.16
CD53P19397 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CD53P19397 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.03□□□□□ -0.16
CD53P19397 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CD53P19397 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.03□□□□□ -0.16
CD53P19397 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD53P19397 SNX18-202ENST00000343017 3140 ntBASIC14.03□□□□□ -0.16
CD53P19397 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD53P19397 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CD53P19397 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
CD53P19397 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CD53P19397 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CD53P19397 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CD53P19397 AL359258.3-201ENST00000622910 2331 ntBASIC14.02□□□□□ -0.16
CD53P19397 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.02□□□□□ -0.16
CD53P19397 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CD53P19397 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CD53P19397 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CD53P19397 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
CD53P19397 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CD53P19397 BTBD7P1-201ENST00000447253 1453 ntBASIC14.02□□□□□ -0.16
CD53P19397 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
CD53P19397 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CD53P19397 AL391825.1-201ENST00000457671 1364 ntBASIC14.02□□□□□ -0.17
CD53P19397 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CD53P19397 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.02□□□□□ -0.17
CD53P19397 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CD53P19397 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CD53P19397 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CD53P19397 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.02□□□□□ -0.17
CD53P19397 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.02□□□□□ -0.17
CD53P19397 AC087499.6-201ENST00000411576 835 ntBASIC14.02□□□□□ -0.17
CD53P19397 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.02□□□□□ -0.17
CD53P19397 RN7SL752P-201ENST00000463779 287 ntBASIC14.02□□□□□ -0.17
CD53P19397 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CD53P19397 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms