Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRT4P19013 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
KRT4P19013 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRT4P19013 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRT4P19013 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRT4P19013 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.47■□□□□ 0.07
KRT4P19013 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRT4P19013 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
KRT4P19013 AL450487.1-201ENST00000426799 995 ntBASIC15.47■□□□□ 0.07
KRT4P19013 FAM58CP-201ENST00000435741 640 ntBASIC15.47■□□□□ 0.07
KRT4P19013 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
KRT4P19013 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.47■□□□□ 0.07
KRT4P19013 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.47■□□□□ 0.07
KRT4P19013 RNA5SP416-201ENST00000516838 111 ntBASIC15.47■□□□□ 0.07
KRT4P19013 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRT4P19013 SLC25A39P2-201ENST00000537614 270 ntBASIC15.47■□□□□ 0.07
KRT4P19013 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.47■□□□□ 0.07
KRT4P19013 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.47■□□□□ 0.07
KRT4P19013 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.47■□□□□ 0.07
KRT4P19013 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.47■□□□□ 0.07
KRT4P19013 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.47■□□□□ 0.07
KRT4P19013 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.47■□□□□ 0.07
KRT4P19013 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.47■□□□□ 0.07
KRT4P19013 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
KRT4P19013 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.47■□□□□ 0.07
KRT4P19013 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRT4P19013 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.47■□□□□ 0.07
KRT4P19013 AC010327.5-201ENST00000586923 3061 ntBASIC15.47■□□□□ 0.07
KRT4P19013 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
KRT4P19013 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
KRT4P19013 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
KRT4P19013 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
KRT4P19013 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.46■□□□□ 0.07
KRT4P19013 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
KRT4P19013 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
KRT4P19013 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
KRT4P19013 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
KRT4P19013 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.46■□□□□ 0.07
KRT4P19013 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
KRT4P19013 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
KRT4P19013 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.46■□□□□ 0.07
KRT4P19013 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
KRT4P19013 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.46■□□□□ 0.07
KRT4P19013 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
KRT4P19013 FO393414.2-201ENST00000405153 598 ntBASIC15.46■□□□□ 0.07
KRT4P19013 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
KRT4P19013 HIST3H2BA-201ENST00000436555 524 ntBASIC15.46■□□□□ 0.07
KRT4P19013 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
KRT4P19013 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.46■□□□□ 0.07
KRT4P19013 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
KRT4P19013 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.46■□□□□ 0.07
KRT4P19013 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
KRT4P19013 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
KRT4P19013 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
KRT4P19013 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
KRT4P19013 REXO1L4P-201ENST00000605109 1937 ntBASIC15.46■□□□□ 0.07
KRT4P19013 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
KRT4P19013 UXT-AS1-201ENST00000590504 1525 ntBASIC15.46■□□□□ 0.07
KRT4P19013 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
KRT4P19013 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
KRT4P19013 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
KRT4P19013 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.46■□□□□ 0.06
KRT4P19013 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
KRT4P19013 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.46■□□□□ 0.06
KRT4P19013 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
KRT4P19013 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.46■□□□□ 0.06
KRT4P19013 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
KRT4P19013 AC012508.2-201ENST00000567613 1472 ntBASIC15.46■□□□□ 0.06
KRT4P19013 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
KRT4P19013 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
KRT4P19013 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
KRT4P19013 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
KRT4P19013 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
KRT4P19013 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
KRT4P19013 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
KRT4P19013 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
KRT4P19013 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
KRT4P19013 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
KRT4P19013 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
KRT4P19013 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.45■□□□□ 0.06
KRT4P19013 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
KRT4P19013 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
KRT4P19013 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
KRT4P19013 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.45■□□□□ 0.06
KRT4P19013 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
KRT4P19013 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
KRT4P19013 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
KRT4P19013 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
KRT4P19013 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
KRT4P19013 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
KRT4P19013 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.45■□□□□ 0.06
KRT4P19013 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.45■□□□□ 0.06
KRT4P19013 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
KRT4P19013 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
KRT4P19013 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.45■□□□□ 0.06
KRT4P19013 TARDBPP1-201ENST00000442013 1203 ntBASIC15.45■□□□□ 0.06
KRT4P19013 AC009078.2-202ENST00000463353 338 ntBASIC15.45■□□□□ 0.06
KRT4P19013 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.45■□□□□ 0.06
KRT4P19013 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
KRT4P19013 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms