Protein–RNA interactions for Protein: P16112

ACAN, Aggrecan core protein, humanhuman

Predictions only

Length 2,415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACANP16112 RN7SL258P-201ENST00000478664 300 ntBASIC12.39□□□□□ -0.43
ACANP16112 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC12.39□□□□□ -0.43
ACANP16112 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ACANP16112 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC12.39□□□□□ -0.43
ACANP16112 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC12.39□□□□□ -0.43
ACANP16112 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
ACANP16112 AC002472.3-201ENST00000640124 621 ntBASIC12.39□□□□□ -0.43
ACANP16112 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ACANP16112 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC12.39□□□□□ -0.43
ACANP16112 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
ACANP16112 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ACANP16112 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
ACANP16112 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
ACANP16112 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ACANP16112 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
ACANP16112 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC12.38□□□□□ -0.43
ACANP16112 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ACANP16112 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ACANP16112 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ACANP16112 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ACANP16112 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ACANP16112 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ACANP16112 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ACANP16112 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ACANP16112 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
ACANP16112 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC12.38□□□□□ -0.43
ACANP16112 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
ACANP16112 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
ACANP16112 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ACANP16112 POLD4-208ENST00000532830 904 ntTSL 3 BASIC12.38□□□□□ -0.43
ACANP16112 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC12.38□□□□□ -0.43
ACANP16112 NUDT4P2-201ENST00000578341 546 ntBASIC12.38□□□□□ -0.43
ACANP16112 AL109837.1-201ENST00000603272 613 ntBASIC12.38□□□□□ -0.43
ACANP16112 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC12.38□□□□□ -0.43
ACANP16112 MIR6769A-201ENST00000617340 73 ntBASIC12.38□□□□□ -0.43
ACANP16112 MIR6816-201ENST00000620368 66 ntBASIC12.38□□□□□ -0.43
ACANP16112 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ACANP16112 E2F3P2-201ENST00000447755 1422 ntBASIC12.38□□□□□ -0.43
ACANP16112 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ACANP16112 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ACANP16112 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ACANP16112 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
ACANP16112 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ACANP16112 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ACANP16112 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ACANP16112 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC12.38□□□□□ -0.43
ACANP16112 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC12.38□□□□□ -0.43
ACANP16112 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ACANP16112 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC12.38□□□□□ -0.43
ACANP16112 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ACANP16112 AC005332.8-201ENST00000622750 2735 ntBASIC12.38□□□□□ -0.43
ACANP16112 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC12.38□□□□□ -0.43
ACANP16112 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
ACANP16112 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC12.38□□□□□ -0.43
ACANP16112 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ACANP16112 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ACANP16112 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ACANP16112 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC12.38□□□□□ -0.43
ACANP16112 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC12.38□□□□□ -0.43
ACANP16112 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ACANP16112 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC12.38□□□□□ -0.43
ACANP16112 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC12.38□□□□□ -0.43
ACANP16112 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC12.38□□□□□ -0.43
ACANP16112 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC12.38□□□□□ -0.43
ACANP16112 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ACANP16112 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
ACANP16112 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC12.38□□□□□ -0.43
ACANP16112 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
ACANP16112 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ACANP16112 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
ACANP16112 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
ACANP16112 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ACANP16112 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ACANP16112 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ACANP16112 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ACANP16112 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ACANP16112 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
ACANP16112 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC12.37□□□□□ -0.43
ACANP16112 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
ACANP16112 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC12.37□□□□□ -0.43
ACANP16112 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ACANP16112 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ACANP16112 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
ACANP16112 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
ACANP16112 AC239868.1-201ENST00000369385 493 ntBASIC12.37□□□□□ -0.43
ACANP16112 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ACANP16112 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ACANP16112 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC12.37□□□□□ -0.43
ACANP16112 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ACANP16112 AC004066.1-201ENST00000502488 802 ntBASIC12.37□□□□□ -0.43
ACANP16112 AC008723.1-201ENST00000506922 207 ntBASIC12.37□□□□□ -0.43
ACANP16112 AP000911.2-201ENST00000534330 502 ntBASIC12.37□□□□□ -0.43
ACANP16112 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC12.37□□□□□ -0.43
ACANP16112 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC12.37□□□□□ -0.43
ACANP16112 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC12.37□□□□□ -0.43
ACANP16112 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
ACANP16112 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ACANP16112 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC12.37□□□□□ -0.43
ACANP16112 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ACANP16112 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms