Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.91■□□□□ 0.14
CD48P09326 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CD48P09326 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD48P09326 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CD48P09326 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CD48P09326 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.91■□□□□ 0.14
CD48P09326 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.91■□□□□ 0.14
CD48P09326 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CD48P09326 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD48P09326 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CD48P09326 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.91■□□□□ 0.14
CD48P09326 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.91■□□□□ 0.14
CD48P09326 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.91■□□□□ 0.14
CD48P09326 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.91■□□□□ 0.14
CD48P09326 AC007787.1-201ENST00000588095 1583 ntBASIC15.91■□□□□ 0.14
CD48P09326 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD48P09326 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD48P09326 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD48P09326 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CD48P09326 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
CD48P09326 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD48P09326 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CD48P09326 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD48P09326 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CD48P09326 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CD48P09326 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CD48P09326 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CD48P09326 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD48P09326 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD48P09326 AC018529.2-202ENST00000611482 3087 ntBASIC15.9■□□□□ 0.14
CD48P09326 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD48P09326 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD48P09326 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD48P09326 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.9■□□□□ 0.14
CD48P09326 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.9■□□□□ 0.14
CD48P09326 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.9■□□□□ 0.14
CD48P09326 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.9■□□□□ 0.14
CD48P09326 AC026410.3-201ENST00000514280 936 ntBASIC15.9■□□□□ 0.14
CD48P09326 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.9■□□□□ 0.14
CD48P09326 RNA5SP421-201ENST00000516864 134 ntBASIC15.9■□□□□ 0.14
CD48P09326 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.9■□□□□ 0.14
CD48P09326 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.9■□□□□ 0.14
CD48P09326 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD48P09326 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD48P09326 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
CD48P09326 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD48P09326 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.9■□□□□ 0.14
CD48P09326 AL390755.1-201ENST00000623716 2027 ntBASIC15.9■□□□□ 0.14
CD48P09326 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CD48P09326 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.9■□□□□ 0.14
CD48P09326 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.9■□□□□ 0.14
CD48P09326 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD48P09326 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD48P09326 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD48P09326 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD48P09326 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CD48P09326 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.9■□□□□ 0.14
CD48P09326 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.9■□□□□ 0.14
CD48P09326 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.9■□□□□ 0.14
CD48P09326 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.9■□□□□ 0.14
CD48P09326 REXO1L5P-201ENST00000622260 2098 ntBASIC15.9■□□□□ 0.14
CD48P09326 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CD48P09326 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CD48P09326 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
CD48P09326 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CD48P09326 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
CD48P09326 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD48P09326 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.89■□□□□ 0.13
CD48P09326 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD48P09326 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD48P09326 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
CD48P09326 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.89■□□□□ 0.13
CD48P09326 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD48P09326 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.89■□□□□ 0.13
CD48P09326 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
CD48P09326 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD48P09326 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CD48P09326 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD48P09326 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD48P09326 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CD48P09326 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.89■□□□□ 0.13
CD48P09326 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD48P09326 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD48P09326 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD48P09326 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
CD48P09326 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.89■□□□□ 0.13
CD48P09326 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.89■□□□□ 0.13
CD48P09326 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.89■□□□□ 0.13
CD48P09326 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.89■□□□□ 0.13
CD48P09326 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.89■□□□□ 0.13
CD48P09326 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CD48P09326 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.89■□□□□ 0.13
CD48P09326 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.89■□□□□ 0.13
CD48P09326 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CD48P09326 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD48P09326 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.89■□□□□ 0.13
CD48P09326 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.89■□□□□ 0.13
CD48P09326 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.89■□□□□ 0.13
CD48P09326 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD48P09326 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms