Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
THBS1P07996 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
THBS1P07996 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
THBS1P07996 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
THBS1P07996 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
THBS1P07996 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
THBS1P07996 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
THBS1P07996 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.17□□□□□ -0.14
THBS1P07996 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
THBS1P07996 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
THBS1P07996 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.17□□□□□ -0.14
THBS1P07996 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
THBS1P07996 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.17□□□□□ -0.14
THBS1P07996 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.17□□□□□ -0.14
THBS1P07996 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
THBS1P07996 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
THBS1P07996 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
THBS1P07996 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
THBS1P07996 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
THBS1P07996 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
THBS1P07996 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
THBS1P07996 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
THBS1P07996 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.17□□□□□ -0.14
THBS1P07996 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
THBS1P07996 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
THBS1P07996 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
THBS1P07996 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.17□□□□□ -0.14
THBS1P07996 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
THBS1P07996 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
THBS1P07996 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.17□□□□□ -0.14
THBS1P07996 KRTAP4-4-201ENST00000390661 1081 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
THBS1P07996 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
THBS1P07996 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.17□□□□□ -0.14
THBS1P07996 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.17□□□□□ -0.14
THBS1P07996 AC002472.2-201ENST00000442739 958 ntBASIC14.17□□□□□ -0.14
THBS1P07996 FAM207CP-201ENST00000443486 507 ntBASIC14.17□□□□□ -0.14
THBS1P07996 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.17□□□□□ -0.14
THBS1P07996 AC004066.1-201ENST00000502488 802 ntBASIC14.17□□□□□ -0.14
THBS1P07996 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.17□□□□□ -0.14
THBS1P07996 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.17□□□□□ -0.14
THBS1P07996 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.17□□□□□ -0.14
THBS1P07996 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.17□□□□□ -0.14
THBS1P07996 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC14.17□□□□□ -0.14
THBS1P07996 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
THBS1P07996 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
THBS1P07996 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.17□□□□□ -0.14
THBS1P07996 AC106881.1-201ENST00000605849 3329 ntBASIC14.17□□□□□ -0.14
THBS1P07996 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
THBS1P07996 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
THBS1P07996 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
THBS1P07996 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.17□□□□□ -0.14
THBS1P07996 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.17□□□□□ -0.14
THBS1P07996 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
THBS1P07996 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
THBS1P07996 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
THBS1P07996 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.16□□□□□ -0.14
THBS1P07996 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.16□□□□□ -0.14
THBS1P07996 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.16□□□□□ -0.14
THBS1P07996 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
THBS1P07996 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
THBS1P07996 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
THBS1P07996 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
THBS1P07996 AC232323.1-201ENST00000540724 2099 ntBASIC14.16□□□□□ -0.14
THBS1P07996 REXO1L5P-201ENST00000622260 2098 ntBASIC14.16□□□□□ -0.14
THBS1P07996 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
THBS1P07996 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
THBS1P07996 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
THBS1P07996 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
THBS1P07996 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
THBS1P07996 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
THBS1P07996 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
THBS1P07996 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
THBS1P07996 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
THBS1P07996 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
THBS1P07996 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
THBS1P07996 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
THBS1P07996 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
THBS1P07996 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
THBS1P07996 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
THBS1P07996 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
THBS1P07996 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
THBS1P07996 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.16□□□□□ -0.14
THBS1P07996 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
THBS1P07996 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
THBS1P07996 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
THBS1P07996 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.16□□□□□ -0.14
THBS1P07996 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.16□□□□□ -0.14
THBS1P07996 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.16□□□□□ -0.14
THBS1P07996 UGT1A2P-201ENST00000454886 866 ntBASIC14.16□□□□□ -0.14
THBS1P07996 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.16□□□□□ -0.14
THBS1P07996 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.16□□□□□ -0.14
THBS1P07996 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
THBS1P07996 GAPDHP40-201ENST00000505218 1006 ntBASIC14.16□□□□□ -0.14
THBS1P07996 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
THBS1P07996 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.16□□□□□ -0.14
THBS1P07996 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
THBS1P07996 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
THBS1P07996 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.16□□□□□ -0.14
THBS1P07996 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.16□□□□□ -0.14
THBS1P07996 SRD5A3P1-201ENST00000603021 949 ntBASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms