Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV3P03979 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC12.14□□□□□ -0.47
TRGV3P03979 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV3P03979 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV3P03979 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV3P03979 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
TRGV3P03979 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV3P03979 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC12.14□□□□□ -0.47
TRGV3P03979 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
TRGV3P03979 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV3P03979 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV3P03979 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV3P03979 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV3P03979 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV3P03979 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.14□□□□□ -0.47
TRGV3P03979 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC12.14□□□□□ -0.47
TRGV3P03979 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC12.13□□□□□ -0.47
TRGV3P03979 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV3P03979 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
TRGV3P03979 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV3P03979 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV3P03979 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV3P03979 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV3P03979 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC12.13□□□□□ -0.47
TRGV3P03979 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC12.13□□□□□ -0.47
TRGV3P03979 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV3P03979 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV3P03979 GSN-206ENST00000394353 2311 ntTSL 2 BASIC12.13□□□□□ -0.47
TRGV3P03979 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC12.13□□□□□ -0.47
TRGV3P03979 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV3P03979 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV3P03979 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC12.13□□□□□ -0.47
TRGV3P03979 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV3P03979 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV3P03979 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC12.13□□□□□ -0.47
TRGV3P03979 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC12.13□□□□□ -0.47
TRGV3P03979 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV3P03979 RHOA-206ENST00000454011 889 ntTSL 2 BASIC12.13□□□□□ -0.47
TRGV3P03979 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.13□□□□□ -0.47
TRGV3P03979 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC12.13□□□□□ -0.47
TRGV3P03979 FADS2-205ENST00000517839 469 ntTSL 3 BASIC12.13□□□□□ -0.47
TRGV3P03979 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC12.13□□□□□ -0.47
TRGV3P03979 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC12.13□□□□□ -0.47
TRGV3P03979 AC123567.1-201ENST00000548294 1261 ntBASIC12.13□□□□□ -0.47
TRGV3P03979 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV3P03979 TBCB-211ENST00000589996 724 ntTSL 3 BASIC12.13□□□□□ -0.47
TRGV3P03979 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC12.13□□□□□ -0.47
TRGV3P03979 AC000095.1-201ENST00000603208 874 ntBASIC12.13□□□□□ -0.47
TRGV3P03979 AC025181.2-201ENST00000606994 802 ntBASIC12.13□□□□□ -0.47
TRGV3P03979 AC093726.1-201ENST00000608064 963 ntBASIC12.13□□□□□ -0.47
TRGV3P03979 AC099568.2-201ENST00000609194 695 ntBASIC12.13□□□□□ -0.47
TRGV3P03979 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV3P03979 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV3P03979 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV3P03979 AC007431.3-201ENST00000623221 587 ntBASIC12.13□□□□□ -0.47
TRGV3P03979 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
TRGV3P03979 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC12.13□□□□□ -0.47
TRGV3P03979 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
TRGV3P03979 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV3P03979 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
TRGV3P03979 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV3P03979 MFF-204ENST00000353339 2186 ntTSL 5 BASIC12.13□□□□□ -0.47
TRGV3P03979 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC12.13□□□□□ -0.47
TRGV3P03979 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC12.13□□□□□ -0.47
TRGV3P03979 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV3P03979 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC12.13□□□□□ -0.47
TRGV3P03979 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
TRGV3P03979 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV3P03979 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
TRGV3P03979 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
TRGV3P03979 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV3P03979 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV3P03979 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV3P03979 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV3P03979 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV3P03979 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV3P03979 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV3P03979 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV3P03979 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV3P03979 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV3P03979 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV3P03979 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV3P03979 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV3P03979 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC12.12□□□□□ -0.47
TRGV3P03979 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV3P03979 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
TRGV3P03979 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
TRGV3P03979 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC12.12□□□□□ -0.47
TRGV3P03979 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV3P03979 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV3P03979 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV3P03979 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC12.12□□□□□ -0.47
TRGV3P03979 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC12.12□□□□□ -0.47
TRGV3P03979 CALY-202ENST00000368555 783 ntTSL 2 BASIC12.12□□□□□ -0.47
TRGV3P03979 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
TRGV3P03979 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC12.12□□□□□ -0.47
TRGV3P03979 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
TRGV3P03979 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC12.12□□□□□ -0.47
TRGV3P03979 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC12.12□□□□□ -0.47
TRGV3P03979 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms