Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
MT-ND1P03886 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MT-ND1P03886 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MT-ND1P03886 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
MT-ND1P03886 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
MT-ND1P03886 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MT-ND1P03886 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
MT-ND1P03886 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
MT-ND1P03886 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
MT-ND1P03886 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
MT-ND1P03886 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MT-ND1P03886 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.57□□□□□ -0.08
MT-ND1P03886 AC142381.1-201ENST00000426099 345 ntBASIC14.57□□□□□ -0.08
MT-ND1P03886 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.57□□□□□ -0.08
MT-ND1P03886 FAM58CP-201ENST00000435741 640 ntBASIC14.57□□□□□ -0.08
MT-ND1P03886 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.57□□□□□ -0.08
MT-ND1P03886 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
MT-ND1P03886 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.57□□□□□ -0.08
MT-ND1P03886 AC092902.6-201ENST00000641783 218 ntBASIC14.57□□□□□ -0.08
MT-ND1P03886 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
MT-ND1P03886 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MT-ND1P03886 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MT-ND1P03886 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
MT-ND1P03886 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
MT-ND1P03886 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
MT-ND1P03886 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
MT-ND1P03886 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.57□□□□□ -0.08
MT-ND1P03886 AC136759.1-202ENST00000530858 2194 ntBASIC14.57□□□□□ -0.08
MT-ND1P03886 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MT-ND1P03886 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.57□□□□□ -0.08
MT-ND1P03886 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
MT-ND1P03886 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MT-ND1P03886 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
MT-ND1P03886 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MT-ND1P03886 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
MT-ND1P03886 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MT-ND1P03886 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MT-ND1P03886 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
MT-ND1P03886 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MT-ND1P03886 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
MT-ND1P03886 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.56□□□□□ -0.08
MT-ND1P03886 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MT-ND1P03886 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
MT-ND1P03886 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
MT-ND1P03886 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MT-ND1P03886 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MT-ND1P03886 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MT-ND1P03886 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.56□□□□□ -0.08
MT-ND1P03886 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MT-ND1P03886 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MT-ND1P03886 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
MT-ND1P03886 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
MT-ND1P03886 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
MT-ND1P03886 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MT-ND1P03886 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
MT-ND1P03886 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MT-ND1P03886 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MT-ND1P03886 FAM220BP-201ENST00000377689 816 ntBASIC14.56□□□□□ -0.08
MT-ND1P03886 AC023274.1-201ENST00000418278 595 ntBASIC14.56□□□□□ -0.08
MT-ND1P03886 ADH5P3-201ENST00000433842 1137 ntBASIC14.56□□□□□ -0.08
MT-ND1P03886 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
MT-ND1P03886 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.56□□□□□ -0.08
MT-ND1P03886 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.56□□□□□ -0.08
MT-ND1P03886 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MT-ND1P03886 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.56□□□□□ -0.08
MT-ND1P03886 AC040169.1-201ENST00000565382 521 ntBASIC14.56□□□□□ -0.08
MT-ND1P03886 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
MT-ND1P03886 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
MT-ND1P03886 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MT-ND1P03886 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
MT-ND1P03886 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MT-ND1P03886 HSPA7-201ENST00000445535 1927 ntBASIC14.56□□□□□ -0.08
MT-ND1P03886 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.56□□□□□ -0.08
MT-ND1P03886 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
MT-ND1P03886 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
MT-ND1P03886 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MT-ND1P03886 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MT-ND1P03886 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MT-ND1P03886 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.56□□□□□ -0.08
MT-ND1P03886 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
MT-ND1P03886 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MT-ND1P03886 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MT-ND1P03886 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MT-ND1P03886 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.56□□□□□ -0.08
MT-ND1P03886 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
MT-ND1P03886 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.56□□□□□ -0.08
MT-ND1P03886 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
MT-ND1P03886 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.56□□□□□ -0.08
MT-ND1P03886 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MT-ND1P03886 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MT-ND1P03886 AC084364.1-201ENST00000551967 1556 ntBASIC14.56□□□□□ -0.08
MT-ND1P03886 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MT-ND1P03886 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
MT-ND1P03886 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
MT-ND1P03886 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
MT-ND1P03886 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
MT-ND1P03886 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
MT-ND1P03886 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.55□□□□□ -0.08
MT-ND1P03886 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.55□□□□□ -0.08
MT-ND1P03886 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms