Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RAPGEF3O95398 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
RAPGEF3O95398 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RAPGEF3O95398 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RAPGEF3O95398 KRT18P36-201ENST00000411618 1276 ntBASIC22.41■■□□□ 1.18
RAPGEF3O95398 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
RAPGEF3O95398 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC22.41■■□□□ 1.18
RAPGEF3O95398 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RAPGEF3O95398 NAMA-206ENST00000605377 509 ntTSL 5 BASIC22.41■■□□□ 1.18
RAPGEF3O95398 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC22.41■■□□□ 1.18
RAPGEF3O95398 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC22.41■■□□□ 1.18
RAPGEF3O95398 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RAPGEF3O95398 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RAPGEF3O95398 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RAPGEF3O95398 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC22.41■■□□□ 1.18
RAPGEF3O95398 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
RAPGEF3O95398 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
RAPGEF3O95398 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RAPGEF3O95398 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RAPGEF3O95398 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
RAPGEF3O95398 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
RAPGEF3O95398 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC22.41■■□□□ 1.18
RAPGEF3O95398 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
RAPGEF3O95398 AC022211.2-201ENST00000585075 2527 ntBASIC22.4■■□□□ 1.18
RAPGEF3O95398 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RAPGEF3O95398 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC22.4■■□□□ 1.18
RAPGEF3O95398 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
RAPGEF3O95398 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC22.4■■□□□ 1.18
RAPGEF3O95398 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC22.4■■□□□ 1.18
RAPGEF3O95398 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC22.4■■□□□ 1.18
RAPGEF3O95398 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
RAPGEF3O95398 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
RAPGEF3O95398 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
RAPGEF3O95398 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC22.4■■□□□ 1.18
RAPGEF3O95398 AC009090.5-201ENST00000624886 2285 ntBASIC22.4■■□□□ 1.18
RAPGEF3O95398 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
RAPGEF3O95398 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
RAPGEF3O95398 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
RAPGEF3O95398 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
RAPGEF3O95398 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
RAPGEF3O95398 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC22.4■■□□□ 1.18
RAPGEF3O95398 SERF2-209ENST00000409646 559 ntTSL 4 BASIC22.4■■□□□ 1.18
RAPGEF3O95398 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
RAPGEF3O95398 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC22.4■■□□□ 1.18
RAPGEF3O95398 DPY19L2P5-201ENST00000456300 331 ntBASIC22.4■■□□□ 1.18
RAPGEF3O95398 PGAM1P12-201ENST00000505622 748 ntBASIC22.4■■□□□ 1.18
RAPGEF3O95398 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC22.4■■□□□ 1.18
RAPGEF3O95398 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
RAPGEF3O95398 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC22.4■■□□□ 1.18
RAPGEF3O95398 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC22.4■■□□□ 1.18
RAPGEF3O95398 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RAPGEF3O95398 AC011471.3-201ENST00000623576 402 ntBASIC22.4■■□□□ 1.18
RAPGEF3O95398 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
RAPGEF3O95398 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC22.4■■□□□ 1.18
RAPGEF3O95398 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC22.4■■□□□ 1.18
RAPGEF3O95398 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC22.4■■□□□ 1.18
RAPGEF3O95398 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RAPGEF3O95398 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC22.4■■□□□ 1.18
RAPGEF3O95398 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC22.4■■□□□ 1.18
RAPGEF3O95398 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
RAPGEF3O95398 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.18
RAPGEF3O95398 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
RAPGEF3O95398 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
RAPGEF3O95398 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
RAPGEF3O95398 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RAPGEF3O95398 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
RAPGEF3O95398 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC22.39■■□□□ 1.17
RAPGEF3O95398 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC22.39■■□□□ 1.17
RAPGEF3O95398 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
RAPGEF3O95398 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
RAPGEF3O95398 MME-218ENST00000625667 363 ntTSL 5 BASIC22.39■■□□□ 1.17
RAPGEF3O95398 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC22.39■■□□□ 1.17
RAPGEF3O95398 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
RAPGEF3O95398 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC22.39■■□□□ 1.17
RAPGEF3O95398 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RAPGEF3O95398 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
RAPGEF3O95398 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
RAPGEF3O95398 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
RAPGEF3O95398 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
RAPGEF3O95398 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RAPGEF3O95398 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RAPGEF3O95398 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC22.39■■□□□ 1.17
RAPGEF3O95398 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC22.39■■□□□ 1.17
RAPGEF3O95398 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
RAPGEF3O95398 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC22.38■■□□□ 1.17
RAPGEF3O95398 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC22.38■■□□□ 1.17
RAPGEF3O95398 AC079328.2-201ENST00000561241 3354 ntBASIC22.38■■□□□ 1.17
RAPGEF3O95398 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
RAPGEF3O95398 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC22.38■■□□□ 1.17
RAPGEF3O95398 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
RAPGEF3O95398 AC092127.1-201ENST00000567093 3455 ntBASIC22.38■■□□□ 1.17
RAPGEF3O95398 AP003680.1-201ENST00000598970 3660 ntBASIC22.38■■□□□ 1.17
RAPGEF3O95398 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RAPGEF3O95398 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
RAPGEF3O95398 LINC02447-202ENST00000501888 2146 ntBASIC22.38■■□□□ 1.17
RAPGEF3O95398 RNA5SP417-201ENST00000516459 108 ntBASIC22.38■■□□□ 1.17
RAPGEF3O95398 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC22.38■■□□□ 1.17
RAPGEF3O95398 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC22.38■■□□□ 1.17
RAPGEF3O95398 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
RAPGEF3O95398 AC007952.4-201ENST00000573866 637 ntBASIC22.38■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms