Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
CSPG5O95196 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CSPG5O95196 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CSPG5O95196 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.53■□□□□ 0.24
CSPG5O95196 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC16.53■□□□□ 0.24
CSPG5O95196 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CSPG5O95196 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CSPG5O95196 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CSPG5O95196 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.53■□□□□ 0.24
CSPG5O95196 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CSPG5O95196 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CSPG5O95196 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CSPG5O95196 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CSPG5O95196 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.52■□□□□ 0.24
CSPG5O95196 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.52■□□□□ 0.24
CSPG5O95196 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CSPG5O95196 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CSPG5O95196 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CSPG5O95196 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CSPG5O95196 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CSPG5O95196 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.52■□□□□ 0.24
CSPG5O95196 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CSPG5O95196 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CSPG5O95196 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
CSPG5O95196 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CSPG5O95196 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CSPG5O95196 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.52■□□□□ 0.24
CSPG5O95196 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.52■□□□□ 0.24
CSPG5O95196 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC16.52■□□□□ 0.24
CSPG5O95196 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC16.52■□□□□ 0.24
CSPG5O95196 UPF3AP2-201ENST00000457924 1132 ntBASIC16.52■□□□□ 0.24
CSPG5O95196 RNA5SP486-201ENST00000515961 83 ntBASIC16.52■□□□□ 0.24
CSPG5O95196 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC16.52■□□□□ 0.24
CSPG5O95196 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.52■□□□□ 0.24
CSPG5O95196 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.52■□□□□ 0.24
CSPG5O95196 BX539320.1-201ENST00000623759 877 ntBASIC16.52■□□□□ 0.24
CSPG5O95196 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC16.52■□□□□ 0.24
CSPG5O95196 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CSPG5O95196 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.52■□□□□ 0.23
CSPG5O95196 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CSPG5O95196 AL138799.1-201ENST00000448213 1675 ntBASIC16.52■□□□□ 0.23
CSPG5O95196 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CSPG5O95196 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CSPG5O95196 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
CSPG5O95196 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CSPG5O95196 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
CSPG5O95196 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.52■□□□□ 0.23
CSPG5O95196 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
CSPG5O95196 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.52■□□□□ 0.23
CSPG5O95196 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
CSPG5O95196 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.52■□□□□ 0.23
CSPG5O95196 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CSPG5O95196 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CSPG5O95196 ME2P1-201ENST00000426028 1970 ntBASIC16.51■□□□□ 0.23
CSPG5O95196 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CSPG5O95196 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CSPG5O95196 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CSPG5O95196 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CSPG5O95196 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.51■□□□□ 0.23
CSPG5O95196 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.51■□□□□ 0.23
CSPG5O95196 AC015818.8-201ENST00000587907 1519 ntBASIC16.51■□□□□ 0.23
CSPG5O95196 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CSPG5O95196 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CSPG5O95196 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
CSPG5O95196 AC006449.6-201ENST00000612330 2296 ntBASIC16.51■□□□□ 0.23
CSPG5O95196 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
CSPG5O95196 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
CSPG5O95196 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CSPG5O95196 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CSPG5O95196 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CSPG5O95196 DEF8-202ENST00000418391 852 ntTSL 2 BASIC16.51■□□□□ 0.23
CSPG5O95196 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC16.51■□□□□ 0.23
CSPG5O95196 REEP1-202ENST00000453231 940 ntTSL 2 BASIC16.51■□□□□ 0.23
CSPG5O95196 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC16.51■□□□□ 0.23
CSPG5O95196 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.51■□□□□ 0.23
CSPG5O95196 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CSPG5O95196 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CSPG5O95196 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CSPG5O95196 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CSPG5O95196 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.51■□□□□ 0.23
CSPG5O95196 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.51■□□□□ 0.23
CSPG5O95196 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CSPG5O95196 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CSPG5O95196 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CSPG5O95196 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CSPG5O95196 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CSPG5O95196 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC16.5■□□□□ 0.23
CSPG5O95196 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CSPG5O95196 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CSPG5O95196 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CSPG5O95196 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CSPG5O95196 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CSPG5O95196 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.5■□□□□ 0.23
CSPG5O95196 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.5■□□□□ 0.23
CSPG5O95196 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CSPG5O95196 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.5■□□□□ 0.23
CSPG5O95196 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.5■□□□□ 0.23
CSPG5O95196 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CSPG5O95196 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CSPG5O95196 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms