Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
CLPXO76031 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLPXO76031 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC14.05□□□□□ -0.16
CLPXO76031 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
CLPXO76031 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.05□□□□□ -0.16
CLPXO76031 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CLPXO76031 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLPXO76031 HADH-202ENST00000403312 1752 ntTSL 5 BASIC14.05□□□□□ -0.16
CLPXO76031 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLPXO76031 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CLPXO76031 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.05□□□□□ -0.16
CLPXO76031 MIR940-201ENST00000401276 94 ntBASIC14.05□□□□□ -0.16
CLPXO76031 KRT18P27-201ENST00000427733 1299 ntBASIC14.05□□□□□ -0.16
CLPXO76031 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.05□□□□□ -0.16
CLPXO76031 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.05□□□□□ -0.16
CLPXO76031 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.05□□□□□ -0.16
CLPXO76031 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.05□□□□□ -0.16
CLPXO76031 AC087641.1-201ENST00000557561 1021 ntBASIC14.05□□□□□ -0.16
CLPXO76031 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.05□□□□□ -0.16
CLPXO76031 AC027601.4-201ENST00000611259 610 ntBASIC14.05□□□□□ -0.16
CLPXO76031 FAM197Y3-203ENST00000618346 717 ntBASIC14.05□□□□□ -0.16
CLPXO76031 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLPXO76031 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.05□□□□□ -0.16
CLPXO76031 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLPXO76031 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLPXO76031 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
CLPXO76031 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.05□□□□□ -0.16
CLPXO76031 AC130686.1-201ENST00000622936 2466 ntBASIC14.05□□□□□ -0.16
CLPXO76031 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLPXO76031 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLPXO76031 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLPXO76031 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLPXO76031 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLPXO76031 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLPXO76031 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLPXO76031 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLPXO76031 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.05□□□□□ -0.16
CLPXO76031 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLPXO76031 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLPXO76031 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CLPXO76031 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLPXO76031 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.05□□□□□ -0.16
CLPXO76031 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLPXO76031 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.05□□□□□ -0.16
CLPXO76031 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.05□□□□□ -0.16
CLPXO76031 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLPXO76031 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLPXO76031 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLPXO76031 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CLPXO76031 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.04□□□□□ -0.16
CLPXO76031 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.04□□□□□ -0.16
CLPXO76031 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLPXO76031 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLPXO76031 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLPXO76031 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLPXO76031 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLPXO76031 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLPXO76031 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLPXO76031 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLPXO76031 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLPXO76031 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLPXO76031 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLPXO76031 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.04□□□□□ -0.16
CLPXO76031 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.04□□□□□ -0.16
CLPXO76031 AL591424.1-201ENST00000442569 1213 ntBASIC14.04□□□□□ -0.16
CLPXO76031 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLPXO76031 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.04□□□□□ -0.16
CLPXO76031 AC105339.3-201ENST00000560043 636 ntBASIC14.04□□□□□ -0.16
CLPXO76031 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLPXO76031 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLPXO76031 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.04□□□□□ -0.16
CLPXO76031 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.04□□□□□ -0.16
CLPXO76031 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.04□□□□□ -0.16
CLPXO76031 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.04□□□□□ -0.16
CLPXO76031 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLPXO76031 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLPXO76031 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.04□□□□□ -0.16
CLPXO76031 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLPXO76031 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.04□□□□□ -0.16
CLPXO76031 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLPXO76031 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLPXO76031 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.04□□□□□ -0.16
CLPXO76031 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLPXO76031 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLPXO76031 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLPXO76031 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLPXO76031 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.04□□□□□ -0.16
CLPXO76031 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.04□□□□□ -0.16
CLPXO76031 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC14.04□□□□□ -0.16
CLPXO76031 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLPXO76031 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.04□□□□□ -0.16
CLPXO76031 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.04□□□□□ -0.16
CLPXO76031 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLPXO76031 AC134407.2-201ENST00000625089 1978 ntBASIC14.03□□□□□ -0.16
CLPXO76031 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLPXO76031 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
CLPXO76031 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.03□□□□□ -0.16
CLPXO76031 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLPXO76031 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC14.03□□□□□ -0.16
CLPXO76031 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms