Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
UPK1BO75841 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
UPK1BO75841 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
UPK1BO75841 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
UPK1BO75841 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
UPK1BO75841 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
UPK1BO75841 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UPK1BO75841 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UPK1BO75841 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.39□□□□□ -0.27
UPK1BO75841 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC13.39□□□□□ -0.27
UPK1BO75841 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UPK1BO75841 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UPK1BO75841 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.39□□□□□ -0.27
UPK1BO75841 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
UPK1BO75841 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
UPK1BO75841 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
UPK1BO75841 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
UPK1BO75841 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
UPK1BO75841 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
UPK1BO75841 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UPK1BO75841 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UPK1BO75841 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
UPK1BO75841 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
UPK1BO75841 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
UPK1BO75841 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC13.39□□□□□ -0.27
UPK1BO75841 AC002347.1-201ENST00000569543 541 ntBASIC13.39□□□□□ -0.27
UPK1BO75841 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
UPK1BO75841 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC13.39□□□□□ -0.27
UPK1BO75841 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC13.39□□□□□ -0.27
UPK1BO75841 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
UPK1BO75841 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
UPK1BO75841 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UPK1BO75841 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
UPK1BO75841 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
UPK1BO75841 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UPK1BO75841 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.39□□□□□ -0.27
UPK1BO75841 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
UPK1BO75841 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
UPK1BO75841 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UPK1BO75841 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
UPK1BO75841 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UPK1BO75841 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC13.39□□□□□ -0.27
UPK1BO75841 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UPK1BO75841 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
UPK1BO75841 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
UPK1BO75841 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
UPK1BO75841 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UPK1BO75841 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
UPK1BO75841 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
UPK1BO75841 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
UPK1BO75841 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UPK1BO75841 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC13.39□□□□□ -0.27
UPK1BO75841 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UPK1BO75841 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC13.38□□□□□ -0.27
UPK1BO75841 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
UPK1BO75841 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UPK1BO75841 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
UPK1BO75841 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
UPK1BO75841 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC13.38□□□□□ -0.27
UPK1BO75841 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UPK1BO75841 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UPK1BO75841 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
UPK1BO75841 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UPK1BO75841 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UPK1BO75841 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.38□□□□□ -0.27
UPK1BO75841 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
UPK1BO75841 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UPK1BO75841 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
UPK1BO75841 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.38□□□□□ -0.27
UPK1BO75841 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UPK1BO75841 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
UPK1BO75841 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.38□□□□□ -0.27
UPK1BO75841 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.38□□□□□ -0.27
UPK1BO75841 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.38□□□□□ -0.27
UPK1BO75841 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UPK1BO75841 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC13.38□□□□□ -0.27
UPK1BO75841 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UPK1BO75841 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UPK1BO75841 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
UPK1BO75841 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC13.38□□□□□ -0.27
UPK1BO75841 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
UPK1BO75841 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC13.38□□□□□ -0.27
UPK1BO75841 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
UPK1BO75841 TMA16-209ENST00000513272 803 ntTSL 2 BASIC13.38□□□□□ -0.27
UPK1BO75841 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC13.38□□□□□ -0.27
UPK1BO75841 BNIP3P18-201ENST00000593976 575 ntBASIC13.38□□□□□ -0.27
UPK1BO75841 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC13.38□□□□□ -0.27
UPK1BO75841 AL031055.1-201ENST00000606362 631 ntBASIC13.38□□□□□ -0.27
UPK1BO75841 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC13.38□□□□□ -0.27
UPK1BO75841 TMEM191A-211ENST00000637163 1067 ntBASIC13.38□□□□□ -0.27
UPK1BO75841 AL022326.1-202ENST00000641533 845 ntBASIC13.38□□□□□ -0.27
UPK1BO75841 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
UPK1BO75841 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
UPK1BO75841 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
UPK1BO75841 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
UPK1BO75841 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC13.38□□□□□ -0.27
UPK1BO75841 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
UPK1BO75841 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
UPK1BO75841 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UPK1BO75841 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms