Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AC126335.2-201ENST00000623362 4637 ntBASIC15.49■□□□□ 0.07
GPC4O75487 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GPC4O75487 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
GPC4O75487 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GPC4O75487 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.49■□□□□ 0.07
GPC4O75487 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.49■□□□□ 0.07
GPC4O75487 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.49■□□□□ 0.07
GPC4O75487 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
GPC4O75487 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.49■□□□□ 0.07
GPC4O75487 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.48■□□□□ 0.07
GPC4O75487 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.48■□□□□ 0.07
GPC4O75487 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
GPC4O75487 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.48■□□□□ 0.07
GPC4O75487 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.48■□□□□ 0.07
GPC4O75487 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
GPC4O75487 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
GPC4O75487 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
GPC4O75487 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
GPC4O75487 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
GPC4O75487 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.48■□□□□ 0.07
GPC4O75487 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
GPC4O75487 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
GPC4O75487 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.48■□□□□ 0.07
GPC4O75487 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
GPC4O75487 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.48■□□□□ 0.07
GPC4O75487 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
GPC4O75487 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
GPC4O75487 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
GPC4O75487 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.48■□□□□ 0.07
GPC4O75487 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.48■□□□□ 0.07
GPC4O75487 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.48■□□□□ 0.07
GPC4O75487 BASP1P1-201ENST00000430708 665 ntBASIC15.48■□□□□ 0.07
GPC4O75487 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.48■□□□□ 0.07
GPC4O75487 AC114501.2-201ENST00000439631 535 ntBASIC15.48■□□□□ 0.07
GPC4O75487 RPL13P2-201ENST00000440687 659 ntBASIC15.48■□□□□ 0.07
GPC4O75487 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.48■□□□□ 0.07
GPC4O75487 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
GPC4O75487 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.48■□□□□ 0.07
GPC4O75487 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.48■□□□□ 0.07
GPC4O75487 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
GPC4O75487 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
GPC4O75487 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.48■□□□□ 0.07
GPC4O75487 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.48■□□□□ 0.07
GPC4O75487 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
GPC4O75487 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
GPC4O75487 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
GPC4O75487 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
GPC4O75487 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
GPC4O75487 CICP24-201ENST00000605464 2705 ntBASIC15.48■□□□□ 0.07
GPC4O75487 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
GPC4O75487 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.48■□□□□ 0.07
GPC4O75487 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
GPC4O75487 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
GPC4O75487 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
GPC4O75487 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
GPC4O75487 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
GPC4O75487 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.48■□□□□ 0.07
GPC4O75487 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
GPC4O75487 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
GPC4O75487 AC091951.1-201ENST00000512854 2465 ntBASIC15.48■□□□□ 0.07
GPC4O75487 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
GPC4O75487 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
GPC4O75487 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
GPC4O75487 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
GPC4O75487 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
GPC4O75487 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
GPC4O75487 BTBD7P1-201ENST00000447253 1453 ntBASIC15.47■□□□□ 0.07
GPC4O75487 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
GPC4O75487 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
GPC4O75487 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
GPC4O75487 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.47■□□□□ 0.07
GPC4O75487 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
GPC4O75487 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
GPC4O75487 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC15.47■□□□□ 0.07
GPC4O75487 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
GPC4O75487 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.47■□□□□ 0.07
GPC4O75487 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.47■□□□□ 0.07
GPC4O75487 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.47■□□□□ 0.07
GPC4O75487 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
GPC4O75487 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
GPC4O75487 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
GPC4O75487 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.47■□□□□ 0.07
GPC4O75487 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.47■□□□□ 0.07
GPC4O75487 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.47■□□□□ 0.07
GPC4O75487 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.47■□□□□ 0.07
GPC4O75487 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.47■□□□□ 0.07
GPC4O75487 AC093214.1-201ENST00000511688 1107 ntBASIC15.47■□□□□ 0.07
GPC4O75487 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.47■□□□□ 0.07
GPC4O75487 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.47■□□□□ 0.07
GPC4O75487 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.47■□□□□ 0.07
GPC4O75487 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.47■□□□□ 0.07
GPC4O75487 AC022144.1-201ENST00000602255 1580 ntBASIC15.47■□□□□ 0.07
GPC4O75487 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.47■□□□□ 0.07
GPC4O75487 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
GPC4O75487 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
GPC4O75487 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
GPC4O75487 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
GPC4O75487 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
GPC4O75487 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
GPC4O75487 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms