Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.38□□□□□ -0.27
PHF1O43189 AC067750.1-201ENST00000608826 6545 ntBASIC13.38□□□□□ -0.27
PHF1O43189 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
PHF1O43189 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
PHF1O43189 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
PHF1O43189 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PHF1O43189 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PHF1O43189 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PHF1O43189 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
PHF1O43189 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.38□□□□□ -0.27
PHF1O43189 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
PHF1O43189 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
PHF1O43189 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PHF1O43189 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.38□□□□□ -0.27
PHF1O43189 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PHF1O43189 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PHF1O43189 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC13.38□□□□□ -0.27
PHF1O43189 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.38□□□□□ -0.27
PHF1O43189 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PHF1O43189 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC13.38□□□□□ -0.27
PHF1O43189 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
PHF1O43189 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PHF1O43189 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PHF1O43189 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
PHF1O43189 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.38□□□□□ -0.27
PHF1O43189 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.38□□□□□ -0.27
PHF1O43189 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PHF1O43189 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.38□□□□□ -0.27
PHF1O43189 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
PHF1O43189 TTTY23B-201ENST00000442790 549 ntBASIC13.38□□□□□ -0.27
PHF1O43189 GNAQP1-201ENST00000444815 1067 ntBASIC13.38□□□□□ -0.27
PHF1O43189 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC13.38□□□□□ -0.27
PHF1O43189 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.38□□□□□ -0.27
PHF1O43189 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.38□□□□□ -0.27
PHF1O43189 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PHF1O43189 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PHF1O43189 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PHF1O43189 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PHF1O43189 AL136982.4-201ENST00000437689 1740 ntBASIC13.38□□□□□ -0.27
PHF1O43189 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PHF1O43189 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PHF1O43189 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PHF1O43189 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.38□□□□□ -0.27
PHF1O43189 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.38□□□□□ -0.27
PHF1O43189 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.38□□□□□ -0.27
PHF1O43189 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
PHF1O43189 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PHF1O43189 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.38□□□□□ -0.27
PHF1O43189 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.38□□□□□ -0.27
PHF1O43189 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.38□□□□□ -0.27
PHF1O43189 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
PHF1O43189 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.38□□□□□ -0.27
PHF1O43189 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.37□□□□□ -0.27
PHF1O43189 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PHF1O43189 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.37□□□□□ -0.27
PHF1O43189 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PHF1O43189 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PHF1O43189 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PHF1O43189 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PHF1O43189 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PHF1O43189 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.37□□□□□ -0.27
PHF1O43189 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
PHF1O43189 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
PHF1O43189 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
PHF1O43189 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PHF1O43189 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.37□□□□□ -0.27
PHF1O43189 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PHF1O43189 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PHF1O43189 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
PHF1O43189 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.37□□□□□ -0.27
PHF1O43189 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
PHF1O43189 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PHF1O43189 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PHF1O43189 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.37□□□□□ -0.27
PHF1O43189 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.37□□□□□ -0.27
PHF1O43189 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PHF1O43189 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.37□□□□□ -0.27
PHF1O43189 HLA-DPB2-205ENST00000435074 1188 ntBASIC13.37□□□□□ -0.27
PHF1O43189 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.37□□□□□ -0.27
PHF1O43189 AC234783.1-201ENST00000441761 496 ntBASIC13.37□□□□□ -0.27
PHF1O43189 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PHF1O43189 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.37□□□□□ -0.27
PHF1O43189 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.37□□□□□ -0.27
PHF1O43189 RN7SL618P-201ENST00000477850 296 ntBASIC13.37□□□□□ -0.27
PHF1O43189 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.37□□□□□ -0.27
PHF1O43189 AC135586.1-201ENST00000539323 574 ntBASIC13.37□□□□□ -0.27
PHF1O43189 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PHF1O43189 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.37□□□□□ -0.27
PHF1O43189 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.37□□□□□ -0.27
PHF1O43189 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC13.37□□□□□ -0.27
PHF1O43189 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
PHF1O43189 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.37□□□□□ -0.27
PHF1O43189 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.37□□□□□ -0.27
PHF1O43189 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.37□□□□□ -0.27
PHF1O43189 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.37□□□□□ -0.27
PHF1O43189 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PHF1O43189 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.37□□□□□ -0.27
PHF1O43189 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PHF1O43189 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PHF1O43189 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms