Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.02■□□□□ -0
E2F3O00716 AC000095.1-201ENST00000603208 874 ntBASIC15.02■□□□□ -0
E2F3O00716 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.02■□□□□ -0
E2F3O00716 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.02■□□□□ -0
E2F3O00716 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
E2F3O00716 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.02□□□□□ -0.01
E2F3O00716 CICP14-201ENST00000629111 2732 ntBASIC15.02□□□□□ -0.01
E2F3O00716 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
E2F3O00716 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
E2F3O00716 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.02□□□□□ -0.01
E2F3O00716 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
E2F3O00716 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.02□□□□□ -0.01
E2F3O00716 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
E2F3O00716 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
E2F3O00716 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
E2F3O00716 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
E2F3O00716 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
E2F3O00716 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
E2F3O00716 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.02□□□□□ -0.01
E2F3O00716 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.02□□□□□ -0.01
E2F3O00716 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
E2F3O00716 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
E2F3O00716 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
E2F3O00716 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
E2F3O00716 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
E2F3O00716 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.01□□□□□ -0.01
E2F3O00716 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
E2F3O00716 AC012508.2-201ENST00000567613 1472 ntBASIC15.01□□□□□ -0.01
E2F3O00716 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
E2F3O00716 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.01□□□□□ -0.01
E2F3O00716 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.01□□□□□ -0.01
E2F3O00716 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.01□□□□□ -0.01
E2F3O00716 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.01□□□□□ -0.01
E2F3O00716 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.01□□□□□ -0.01
E2F3O00716 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.01□□□□□ -0.01
E2F3O00716 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.01□□□□□ -0.01
E2F3O00716 AL136379.1-201ENST00000623471 2642 ntBASIC15.01□□□□□ -0.01
E2F3O00716 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
E2F3O00716 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
E2F3O00716 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
E2F3O00716 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
E2F3O00716 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
E2F3O00716 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.01□□□□□ -0.01
E2F3O00716 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
E2F3O00716 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
E2F3O00716 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
E2F3O00716 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
E2F3O00716 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
E2F3O00716 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.01□□□□□ -0.01
E2F3O00716 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.01□□□□□ -0.01
E2F3O00716 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.01□□□□□ -0.01
E2F3O00716 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.01□□□□□ -0.01
E2F3O00716 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
E2F3O00716 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.01□□□□□ -0.01
E2F3O00716 SPTLC1P1-201ENST00000447199 261 ntBASIC15.01□□□□□ -0.01
E2F3O00716 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.01□□□□□ -0.01
E2F3O00716 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
E2F3O00716 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.01□□□□□ -0.01
E2F3O00716 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.01□□□□□ -0.01
E2F3O00716 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.01□□□□□ -0.01
E2F3O00716 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
E2F3O00716 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.01□□□□□ -0.01
E2F3O00716 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
E2F3O00716 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
E2F3O00716 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
E2F3O00716 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
E2F3O00716 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
E2F3O00716 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.01□□□□□ -0.01
E2F3O00716 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.01□□□□□ -0.01
E2F3O00716 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.01□□□□□ -0.01
E2F3O00716 AL009178.2-201ENST00000597278 2719 ntBASIC15.01□□□□□ -0.01
E2F3O00716 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
E2F3O00716 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.01□□□□□ -0.01
E2F3O00716 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
E2F3O00716 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
E2F3O00716 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15□□□□□ -0.01
E2F3O00716 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
E2F3O00716 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
E2F3O00716 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15□□□□□ -0.01
E2F3O00716 AC068587.6-202ENST00000641839 5619 ntBASIC15□□□□□ -0.01
E2F3O00716 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15□□□□□ -0.01
E2F3O00716 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15□□□□□ -0.01
E2F3O00716 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
E2F3O00716 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
E2F3O00716 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
E2F3O00716 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15□□□□□ -0.01
E2F3O00716 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15□□□□□ -0.01
E2F3O00716 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
E2F3O00716 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
E2F3O00716 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
E2F3O00716 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
E2F3O00716 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
E2F3O00716 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15□□□□□ -0.01
E2F3O00716 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15□□□□□ -0.01
E2F3O00716 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15□□□□□ -0.01
E2F3O00716 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15□□□□□ -0.01
E2F3O00716 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15□□□□□ -0.01
E2F3O00716 AC114501.2-201ENST00000439631 535 ntBASIC15□□□□□ -0.01
E2F3O00716 HNRNPA3P5-201ENST00000455201 833 ntBASIC15□□□□□ -0.01
E2F3O00716 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms