Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOX1O00570 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOX1O00570 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SOX1O00570 LINC01815-202ENST00000641468 1409 ntBASIC16.04■□□□□ 0.16
SOX1O00570 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.04■□□□□ 0.16
SOX1O00570 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOX1O00570 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOX1O00570 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOX1O00570 CCL25-202ENST00000315626 450 ntTSL 2 BASIC16.04■□□□□ 0.16
SOX1O00570 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC16.04■□□□□ 0.16
SOX1O00570 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC16.04■□□□□ 0.16
SOX1O00570 TSPY25P-201ENST00000429463 745 ntBASIC16.04■□□□□ 0.16
SOX1O00570 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC16.04■□□□□ 0.16
SOX1O00570 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SOX1O00570 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SOX1O00570 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC16.04■□□□□ 0.16
SOX1O00570 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.04■□□□□ 0.16
SOX1O00570 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOX1O00570 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC16.04■□□□□ 0.16
SOX1O00570 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC16.04■□□□□ 0.16
SOX1O00570 AC084262.1-201ENST00000567818 751 ntBASIC16.04■□□□□ 0.16
SOX1O00570 AC018846.1-201ENST00000568231 183 ntBASIC16.04■□□□□ 0.16
SOX1O00570 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
SOX1O00570 MIR4313-201ENST00000580760 101 ntBASIC16.04■□□□□ 0.16
SOX1O00570 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SOX1O00570 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
SOX1O00570 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOX1O00570 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOX1O00570 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.04■□□□□ 0.16
SOX1O00570 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.04■□□□□ 0.16
SOX1O00570 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SOX1O00570 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.04■□□□□ 0.16
SOX1O00570 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOX1O00570 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOX1O00570 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC16.04■□□□□ 0.16
SOX1O00570 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
SOX1O00570 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SOX1O00570 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOX1O00570 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
SOX1O00570 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SOX1O00570 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SOX1O00570 KRT8P31-201ENST00000504812 1408 ntBASIC16.03■□□□□ 0.16
SOX1O00570 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SOX1O00570 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SOX1O00570 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SOX1O00570 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SOX1O00570 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SOX1O00570 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SOX1O00570 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SOX1O00570 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SOX1O00570 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SOX1O00570 KRT17P5-201ENST00000332088 839 ntBASIC16.03■□□□□ 0.16
SOX1O00570 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SOX1O00570 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SOX1O00570 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.03■□□□□ 0.16
SOX1O00570 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC16.03■□□□□ 0.16
SOX1O00570 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC16.03■□□□□ 0.16
SOX1O00570 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
SOX1O00570 AC026470.1-201ENST00000478038 846 ntBASIC16.03■□□□□ 0.16
SOX1O00570 AC023906.1-201ENST00000486386 453 ntBASIC16.03■□□□□ 0.16
SOX1O00570 RPS23-204ENST00000507980 836 ntTSL 2 BASIC16.03■□□□□ 0.16
SOX1O00570 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC16.03■□□□□ 0.16
SOX1O00570 RNA5SP417-201ENST00000516459 108 ntBASIC16.03■□□□□ 0.16
SOX1O00570 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SOX1O00570 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
SOX1O00570 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SOX1O00570 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC16.03■□□□□ 0.16
SOX1O00570 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC16.03■□□□□ 0.16
SOX1O00570 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
SOX1O00570 NAV1-210ENST00000593583 726 ntBASIC16.03■□□□□ 0.16
SOX1O00570 AC110057.1-201ENST00000636031 898 ntBASIC16.03■□□□□ 0.16
SOX1O00570 AL603764.1-201ENST00000636452 321 ntBASIC16.03■□□□□ 0.16
SOX1O00570 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
SOX1O00570 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SOX1O00570 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.03■□□□□ 0.16
SOX1O00570 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.03■□□□□ 0.16
SOX1O00570 HLA-DQB1-202ENST00000399079 1501 ntBASIC16.03■□□□□ 0.16
SOX1O00570 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SOX1O00570 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.03■□□□□ 0.16
SOX1O00570 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SOX1O00570 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SOX1O00570 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SOX1O00570 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SOX1O00570 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SOX1O00570 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.02■□□□□ 0.16
SOX1O00570 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SOX1O00570 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SOX1O00570 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
SOX1O00570 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SOX1O00570 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SOX1O00570 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC16.02■□□□□ 0.16
SOX1O00570 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SOX1O00570 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SOX1O00570 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SOX1O00570 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
SOX1O00570 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SOX1O00570 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
SOX1O00570 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SOX1O00570 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SOX1O00570 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms