Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UPK2O00526 CNN2P2-201ENST00000443536 909 ntBASIC12.36□□□□□ -0.43
UPK2O00526 CNN2P3-201ENST00000450201 906 ntBASIC12.36□□□□□ -0.43
UPK2O00526 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC12.36□□□□□ -0.43
UPK2O00526 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC12.36□□□□□ -0.43
UPK2O00526 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC12.36□□□□□ -0.43
UPK2O00526 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC12.36□□□□□ -0.43
UPK2O00526 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC12.36□□□□□ -0.43
UPK2O00526 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
UPK2O00526 AL596442.2-201ENST00000610240 980 ntBASIC12.36□□□□□ -0.43
UPK2O00526 AL136317.3-201ENST00000618497 906 ntBASIC12.36□□□□□ -0.43
UPK2O00526 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC12.36□□□□□ -0.43
UPK2O00526 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC12.36□□□□□ -0.43
UPK2O00526 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UPK2O00526 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UPK2O00526 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC12.36□□□□□ -0.43
UPK2O00526 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UPK2O00526 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.36□□□□□ -0.43
UPK2O00526 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UPK2O00526 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UPK2O00526 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
UPK2O00526 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UPK2O00526 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
UPK2O00526 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
UPK2O00526 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
UPK2O00526 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UPK2O00526 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
UPK2O00526 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UPK2O00526 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UPK2O00526 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
UPK2O00526 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UPK2O00526 AC007191.1-201ENST00000623179 2995 ntBASIC12.36□□□□□ -0.43
UPK2O00526 TUBB3P1-201ENST00000405796 1332 ntBASIC12.36□□□□□ -0.43
UPK2O00526 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
UPK2O00526 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
UPK2O00526 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
UPK2O00526 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
UPK2O00526 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
UPK2O00526 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
UPK2O00526 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC12.35□□□□□ -0.43
UPK2O00526 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
UPK2O00526 AC026748.1-201ENST00000624349 3251 ntBASIC12.35□□□□□ -0.43
UPK2O00526 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
UPK2O00526 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
UPK2O00526 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC12.35□□□□□ -0.43
UPK2O00526 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC12.35□□□□□ -0.43
UPK2O00526 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
UPK2O00526 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
UPK2O00526 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
UPK2O00526 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
UPK2O00526 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
UPK2O00526 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
UPK2O00526 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
UPK2O00526 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
UPK2O00526 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
UPK2O00526 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
UPK2O00526 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC12.35□□□□□ -0.43
UPK2O00526 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
UPK2O00526 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC12.35□□□□□ -0.43
UPK2O00526 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC12.35□□□□□ -0.43
UPK2O00526 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC12.35□□□□□ -0.43
UPK2O00526 SYS1-203ENST00000414310 795 ntTSL 3 BASIC12.35□□□□□ -0.43
UPK2O00526 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC12.35□□□□□ -0.43
UPK2O00526 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC12.35□□□□□ -0.43
UPK2O00526 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC12.35□□□□□ -0.43
UPK2O00526 AC004967.1-201ENST00000453589 447 ntBASIC12.35□□□□□ -0.43
UPK2O00526 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC12.35□□□□□ -0.43
UPK2O00526 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC12.35□□□□□ -0.43
UPK2O00526 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
UPK2O00526 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC12.35□□□□□ -0.43
UPK2O00526 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
UPK2O00526 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC12.35□□□□□ -0.43
UPK2O00526 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC12.35□□□□□ -0.43
UPK2O00526 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC12.35□□□□□ -0.43
UPK2O00526 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC12.35□□□□□ -0.43
UPK2O00526 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.35□□□□□ -0.43
UPK2O00526 Z92544.3-201ENST00000624747 417 ntBASIC12.35□□□□□ -0.43
UPK2O00526 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.35□□□□□ -0.43
UPK2O00526 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
UPK2O00526 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
UPK2O00526 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC12.35□□□□□ -0.43
UPK2O00526 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.35□□□□□ -0.43
UPK2O00526 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
UPK2O00526 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
UPK2O00526 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
UPK2O00526 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
UPK2O00526 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
UPK2O00526 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
UPK2O00526 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
UPK2O00526 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
UPK2O00526 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
UPK2O00526 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
UPK2O00526 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
UPK2O00526 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
UPK2O00526 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UPK2O00526 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UPK2O00526 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC12.34□□□□□ -0.43
UPK2O00526 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
UPK2O00526 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
UPK2O00526 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms