Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC66A2RUB6 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CCDC66A2RUB6 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC66A2RUB6 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.78■□□□□ 0.28
CCDC66A2RUB6 FOXO1B-201ENST00000504678 1527 ntBASIC16.78■□□□□ 0.28
CCDC66A2RUB6 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC66A2RUB6 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC66A2RUB6 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC66A2RUB6 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CCDC66A2RUB6 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CCDC66A2RUB6 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC66A2RUB6 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC66A2RUB6 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC66A2RUB6 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC66A2RUB6 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC66A2RUB6 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC66A2RUB6 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CCDC66A2RUB6 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
CCDC66A2RUB6 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CCDC66A2RUB6 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC66A2RUB6 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC66A2RUB6 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC66A2RUB6 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC66A2RUB6 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC66A2RUB6 BNIP3P1-202ENST00000550043 1585 ntBASIC16.77■□□□□ 0.28
CCDC66A2RUB6 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC66A2RUB6 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC16.77■□□□□ 0.28
CCDC66A2RUB6 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
CCDC66A2RUB6 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC66A2RUB6 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC66A2RUB6 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC66A2RUB6 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC66A2RUB6 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC66A2RUB6 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC66A2RUB6 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.77■□□□□ 0.28
CCDC66A2RUB6 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC66A2RUB6 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC66A2RUB6 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.77■□□□□ 0.28
CCDC66A2RUB6 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC66A2RUB6 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.77■□□□□ 0.28
CCDC66A2RUB6 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.77■□□□□ 0.28
CCDC66A2RUB6 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.77■□□□□ 0.28
CCDC66A2RUB6 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.77■□□□□ 0.28
CCDC66A2RUB6 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.77■□□□□ 0.28
CCDC66A2RUB6 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.77■□□□□ 0.28
CCDC66A2RUB6 AL513190.1-201ENST00000621254 727 ntBASIC16.77■□□□□ 0.28
CCDC66A2RUB6 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CCDC66A2RUB6 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC66A2RUB6 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC66A2RUB6 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC66A2RUB6 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.77■□□□□ 0.27
CCDC66A2RUB6 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC66A2RUB6 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.77■□□□□ 0.27
CCDC66A2RUB6 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC66A2RUB6 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
CCDC66A2RUB6 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC66A2RUB6 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC66A2RUB6 AL928921.2-201ENST00000641325 2442 ntBASIC16.77■□□□□ 0.27
CCDC66A2RUB6 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC66A2RUB6 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC66A2RUB6 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC66A2RUB6 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
CCDC66A2RUB6 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC66A2RUB6 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC66A2RUB6 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC66A2RUB6 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC66A2RUB6 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
CCDC66A2RUB6 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.77■□□□□ 0.27
CCDC66A2RUB6 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.77■□□□□ 0.27
CCDC66A2RUB6 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC66A2RUB6 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC66A2RUB6 AL359881.3-201ENST00000602640 1721 ntBASIC16.76■□□□□ 0.27
CCDC66A2RUB6 AJ011931.1-201ENST00000618749 2492 ntBASIC16.76■□□□□ 0.27
CCDC66A2RUB6 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
CCDC66A2RUB6 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC66A2RUB6 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC66A2RUB6 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC66A2RUB6 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC66A2RUB6 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC66A2RUB6 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC66A2RUB6 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.76■□□□□ 0.27
CCDC66A2RUB6 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC66A2RUB6 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC66A2RUB6 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.76■□□□□ 0.27
CCDC66A2RUB6 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC66A2RUB6 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC66A2RUB6 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC66A2RUB6 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC66A2RUB6 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.76■□□□□ 0.27
CCDC66A2RUB6 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC66A2RUB6 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC66A2RUB6 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC66A2RUB6 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.76■□□□□ 0.27
CCDC66A2RUB6 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC66A2RUB6 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CCDC66A2RUB6 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC66A2RUB6 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC66A2RUB6 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
CCDC66A2RUB6 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC66A2RUB6 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms