Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 AC106028.4-201ENST00000614509 607 ntBASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 PPP1R26P4-201ENST00000619065 3527 ntBASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 CNTNAP3P2-201ENST00000617175 3861 ntBASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 AC138969.2-201ENST00000532739 9932 ntBASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 PMS2P2-201ENST00000425039 1128 ntBASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 AC055876.3-201ENST00000431496 288 ntBASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 SSH2-210ENST00000582084 560 ntTSL 3 BASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 AL844908.2-201ENST00000609461 460 ntBASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 AC138649.4-201ENST00000612222 287 ntBASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 AC093512.1-201ENST00000617969 520 ntBASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 AL390754.1-201ENST00000619088 582 ntBASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 AL590560.3-201ENST00000623350 461 ntBASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 ORC5-208ENST00000626700 344 ntTSL 3 BASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 AC136621.1-201ENST00000624017 2304 ntBASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
HLA-DRB4X5D2U9 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
HLA-DRB4X5D2U9 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.55
HLA-DRB4X5D2U9 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
HLA-DRB4X5D2U9 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.55
HLA-DRB4X5D2U9 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
HLA-DRB4X5D2U9 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
HLA-DRB4X5D2U9 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.55
HLA-DRB4X5D2U9 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC11.65□□□□□ -0.55
HLA-DRB4X5D2U9 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
HLA-DRB4X5D2U9 CICP23-201ENST00000605013 2741 ntBASIC11.65□□□□□ -0.55
HLA-DRB4X5D2U9 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms