Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTCH2Q9Y6C5 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTCH2Q9Y6C5 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTCH2Q9Y6C5 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTCH2Q9Y6C5 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTCH2Q9Y6C5 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTCH2Q9Y6C5 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTCH2Q9Y6C5 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTCH2Q9Y6C5 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTCH2Q9Y6C5 AK6-201ENST00000380818 1183 ntTSL 2 BASIC17.1■□□□□ 0.33
PTCH2Q9Y6C5 MIR648-201ENST00000385046 94 ntBASIC17.1■□□□□ 0.33
PTCH2Q9Y6C5 RN7SKP175-201ENST00000408472 289 ntBASIC17.1■□□□□ 0.33
PTCH2Q9Y6C5 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC17.1■□□□□ 0.33
PTCH2Q9Y6C5 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC17.1■□□□□ 0.33
PTCH2Q9Y6C5 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC17.1■□□□□ 0.33
PTCH2Q9Y6C5 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC17.1■□□□□ 0.33
PTCH2Q9Y6C5 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTCH2Q9Y6C5 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC17.1■□□□□ 0.33
PTCH2Q9Y6C5 NSD1-211ENST00000511258 809 ntTSL 3 BASIC17.1■□□□□ 0.33
PTCH2Q9Y6C5 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC17.1■□□□□ 0.33
PTCH2Q9Y6C5 TPM1-223ENST00000560445 485 ntTSL 3 BASIC17.1■□□□□ 0.33
PTCH2Q9Y6C5 SAMD11P1-201ENST00000571429 661 ntBASIC17.1■□□□□ 0.33
PTCH2Q9Y6C5 MIR3677-201ENST00000578964 60 ntBASIC17.1■□□□□ 0.33
PTCH2Q9Y6C5 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC17.1■□□□□ 0.33
PTCH2Q9Y6C5 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTCH2Q9Y6C5 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.1■□□□□ 0.33
PTCH2Q9Y6C5 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTCH2Q9Y6C5 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTCH2Q9Y6C5 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
PTCH2Q9Y6C5 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTCH2Q9Y6C5 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
PTCH2Q9Y6C5 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTCH2Q9Y6C5 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTCH2Q9Y6C5 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC17.1■□□□□ 0.33
PTCH2Q9Y6C5 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.1■□□□□ 0.33
PTCH2Q9Y6C5 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PTCH2Q9Y6C5 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PTCH2Q9Y6C5 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.09■□□□□ 0.33
PTCH2Q9Y6C5 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTCH2Q9Y6C5 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTCH2Q9Y6C5 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTCH2Q9Y6C5 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
PTCH2Q9Y6C5 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC17.09■□□□□ 0.33
PTCH2Q9Y6C5 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTCH2Q9Y6C5 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTCH2Q9Y6C5 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTCH2Q9Y6C5 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTCH2Q9Y6C5 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PTCH2Q9Y6C5 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PTCH2Q9Y6C5 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTCH2Q9Y6C5 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.09■□□□□ 0.33
PTCH2Q9Y6C5 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PTCH2Q9Y6C5 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTCH2Q9Y6C5 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PTCH2Q9Y6C5 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC17.09■□□□□ 0.33
PTCH2Q9Y6C5 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC17.09■□□□□ 0.33
PTCH2Q9Y6C5 KLF2P1-201ENST00000447438 1042 ntBASIC17.09■□□□□ 0.33
PTCH2Q9Y6C5 AC018463.1-201ENST00000456674 917 ntBASIC17.09■□□□□ 0.33
PTCH2Q9Y6C5 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC17.09■□□□□ 0.33
PTCH2Q9Y6C5 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC17.09■□□□□ 0.33
PTCH2Q9Y6C5 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTCH2Q9Y6C5 AL022344.2-201ENST00000568976 968 ntBASIC17.09■□□□□ 0.33
PTCH2Q9Y6C5 AC138466.4-201ENST00000623965 852 ntBASIC17.09■□□□□ 0.33
PTCH2Q9Y6C5 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
PTCH2Q9Y6C5 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC17.09■□□□□ 0.33
PTCH2Q9Y6C5 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC17.09■□□□□ 0.33
PTCH2Q9Y6C5 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PTCH2Q9Y6C5 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTCH2Q9Y6C5 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.09■□□□□ 0.33
PTCH2Q9Y6C5 MBLAC2-202ENST00000514906 1936 ntBASIC17.09■□□□□ 0.33
PTCH2Q9Y6C5 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PTCH2Q9Y6C5 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PTCH2Q9Y6C5 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
PTCH2Q9Y6C5 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PTCH2Q9Y6C5 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTCH2Q9Y6C5 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.09■□□□□ 0.33
PTCH2Q9Y6C5 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PTCH2Q9Y6C5 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.09■□□□□ 0.33
PTCH2Q9Y6C5 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PTCH2Q9Y6C5 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTCH2Q9Y6C5 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTCH2Q9Y6C5 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
PTCH2Q9Y6C5 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.08■□□□□ 0.33
PTCH2Q9Y6C5 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
PTCH2Q9Y6C5 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PTCH2Q9Y6C5 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
PTCH2Q9Y6C5 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
PTCH2Q9Y6C5 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.08■□□□□ 0.33
PTCH2Q9Y6C5 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PTCH2Q9Y6C5 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PTCH2Q9Y6C5 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.08■□□□□ 0.33
PTCH2Q9Y6C5 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PTCH2Q9Y6C5 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PTCH2Q9Y6C5 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PTCH2Q9Y6C5 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PTCH2Q9Y6C5 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PTCH2Q9Y6C5 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTCH2Q9Y6C5 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PTCH2Q9Y6C5 FAU-202ENST00000434372 533 ntTSL 2 BASIC17.08■□□□□ 0.32
PTCH2Q9Y6C5 AL139008.1-201ENST00000437894 228 ntBASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms