Protein–RNA interactions for Protein: Q9Y5U2

TSSC4, Protein TSSC4, humanhuman

Predicted RBP Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4Q9Y5U2 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
TSSC4Q9Y5U2 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
TSSC4Q9Y5U2 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TSSC4Q9Y5U2 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TSSC4Q9Y5U2 TK1-203ENST00000588734 1681 ntTSL 2 BASIC12.13□□□□□ -0.47
TSSC4Q9Y5U2 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TSSC4Q9Y5U2 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC12.13□□□□□ -0.47
TSSC4Q9Y5U2 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TSSC4Q9Y5U2 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TSSC4Q9Y5U2 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TSSC4Q9Y5U2 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TSSC4Q9Y5U2 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TSSC4Q9Y5U2 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
TSSC4Q9Y5U2 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
TSSC4Q9Y5U2 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC12.13□□□□□ -0.47
TSSC4Q9Y5U2 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TSSC4Q9Y5U2 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TSSC4Q9Y5U2 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC12.13□□□□□ -0.47
TSSC4Q9Y5U2 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TSSC4Q9Y5U2 AC005229.1-201ENST00000392885 409 ntBASIC12.13□□□□□ -0.47
TSSC4Q9Y5U2 MPV17-208ENST00000405076 603 ntTSL 5 BASIC12.13□□□□□ -0.47
TSSC4Q9Y5U2 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TSSC4Q9Y5U2 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TSSC4Q9Y5U2 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC12.13□□□□□ -0.47
TSSC4Q9Y5U2 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC12.13□□□□□ -0.47
TSSC4Q9Y5U2 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC12.13□□□□□ -0.47
TSSC4Q9Y5U2 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC12.13□□□□□ -0.47
TSSC4Q9Y5U2 AC068587.3-201ENST00000526613 355 ntBASIC12.13□□□□□ -0.47
TSSC4Q9Y5U2 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC12.13□□□□□ -0.47
TSSC4Q9Y5U2 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC12.13□□□□□ -0.47
TSSC4Q9Y5U2 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC12.13□□□□□ -0.47
TSSC4Q9Y5U2 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC12.13□□□□□ -0.47
TSSC4Q9Y5U2 AP001063.1-201ENST00000568332 529 ntBASIC12.13□□□□□ -0.47
TSSC4Q9Y5U2 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC12.13□□□□□ -0.47
TSSC4Q9Y5U2 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TSSC4Q9Y5U2 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC12.13□□□□□ -0.47
TSSC4Q9Y5U2 METTL26-214ENST00000614890 801 ntTSL 3 BASIC12.13□□□□□ -0.47
TSSC4Q9Y5U2 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
TSSC4Q9Y5U2 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TSSC4Q9Y5U2 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
TSSC4Q9Y5U2 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
TSSC4Q9Y5U2 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TSSC4Q9Y5U2 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TSSC4Q9Y5U2 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TSSC4Q9Y5U2 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC12.13□□□□□ -0.47
TSSC4Q9Y5U2 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TSSC4Q9Y5U2 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TSSC4Q9Y5U2 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TSSC4Q9Y5U2 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC12.13□□□□□ -0.47
TSSC4Q9Y5U2 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC12.13□□□□□ -0.47
TSSC4Q9Y5U2 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TSSC4Q9Y5U2 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TSSC4Q9Y5U2 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC12.12□□□□□ -0.47
TSSC4Q9Y5U2 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC12.12□□□□□ -0.47
TSSC4Q9Y5U2 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TSSC4Q9Y5U2 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC12.12□□□□□ -0.47
TSSC4Q9Y5U2 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TSSC4Q9Y5U2 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TSSC4Q9Y5U2 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
TSSC4Q9Y5U2 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TSSC4Q9Y5U2 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC12.12□□□□□ -0.47
TSSC4Q9Y5U2 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TSSC4Q9Y5U2 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TSSC4Q9Y5U2 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TSSC4Q9Y5U2 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TSSC4Q9Y5U2 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TSSC4Q9Y5U2 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
TSSC4Q9Y5U2 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TSSC4Q9Y5U2 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC12.12□□□□□ -0.47
TSSC4Q9Y5U2 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TSSC4Q9Y5U2 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
TSSC4Q9Y5U2 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC12.12□□□□□ -0.47
TSSC4Q9Y5U2 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TSSC4Q9Y5U2 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TSSC4Q9Y5U2 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TSSC4Q9Y5U2 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
TSSC4Q9Y5U2 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TSSC4Q9Y5U2 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TSSC4Q9Y5U2 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC12.12□□□□□ -0.47
TSSC4Q9Y5U2 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TSSC4Q9Y5U2 HLA-V-201ENST00000429037 534 ntBASIC12.12□□□□□ -0.47
TSSC4Q9Y5U2 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TSSC4Q9Y5U2 KLF2P4-201ENST00000451959 1225 ntBASIC12.12□□□□□ -0.47
TSSC4Q9Y5U2 CROCCP4-201ENST00000457096 498 ntBASIC12.12□□□□□ -0.47
TSSC4Q9Y5U2 EHF-205ENST00000527935 557 ntTSL 2 BASIC12.12□□□□□ -0.47
TSSC4Q9Y5U2 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC12.12□□□□□ -0.47
TSSC4Q9Y5U2 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
TSSC4Q9Y5U2 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
TSSC4Q9Y5U2 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TSSC4Q9Y5U2 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC12.12□□□□□ -0.47
TSSC4Q9Y5U2 AC093813.1-201ENST00000605066 256 ntBASIC12.12□□□□□ -0.47
TSSC4Q9Y5U2 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC12.12□□□□□ -0.47
TSSC4Q9Y5U2 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
TSSC4Q9Y5U2 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TSSC4Q9Y5U2 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TSSC4Q9Y5U2 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TSSC4Q9Y5U2 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
TSSC4Q9Y5U2 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
TSSC4Q9Y5U2 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TSSC4Q9Y5U2 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 900.4 ms