Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
VPS9D1Q9Y2B5 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.39■□□□□ 0.05
VPS9D1Q9Y2B5 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.39■□□□□ 0.05
VPS9D1Q9Y2B5 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
VPS9D1Q9Y2B5 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
VPS9D1Q9Y2B5 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
VPS9D1Q9Y2B5 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
VPS9D1Q9Y2B5 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
VPS9D1Q9Y2B5 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
VPS9D1Q9Y2B5 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
VPS9D1Q9Y2B5 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
VPS9D1Q9Y2B5 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
VPS9D1Q9Y2B5 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
VPS9D1Q9Y2B5 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
VPS9D1Q9Y2B5 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.39■□□□□ 0.05
VPS9D1Q9Y2B5 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
VPS9D1Q9Y2B5 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
VPS9D1Q9Y2B5 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
VPS9D1Q9Y2B5 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.39■□□□□ 0.05
VPS9D1Q9Y2B5 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
VPS9D1Q9Y2B5 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.39■□□□□ 0.05
VPS9D1Q9Y2B5 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.39■□□□□ 0.05
VPS9D1Q9Y2B5 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.39■□□□□ 0.05
VPS9D1Q9Y2B5 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.39■□□□□ 0.05
VPS9D1Q9Y2B5 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
VPS9D1Q9Y2B5 AC020910.4-201ENST00000612269 540 ntBASIC15.39■□□□□ 0.05
VPS9D1Q9Y2B5 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
VPS9D1Q9Y2B5 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.39■□□□□ 0.05
VPS9D1Q9Y2B5 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
VPS9D1Q9Y2B5 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
VPS9D1Q9Y2B5 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
VPS9D1Q9Y2B5 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.39■□□□□ 0.05
VPS9D1Q9Y2B5 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
VPS9D1Q9Y2B5 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.39■□□□□ 0.05
VPS9D1Q9Y2B5 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
VPS9D1Q9Y2B5 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
VPS9D1Q9Y2B5 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
VPS9D1Q9Y2B5 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
VPS9D1Q9Y2B5 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.39■□□□□ 0.05
VPS9D1Q9Y2B5 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
VPS9D1Q9Y2B5 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.39■□□□□ 0.05
VPS9D1Q9Y2B5 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
VPS9D1Q9Y2B5 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.39■□□□□ 0.05
VPS9D1Q9Y2B5 CICP11-201ENST00000434745 2827 ntBASIC15.39■□□□□ 0.05
VPS9D1Q9Y2B5 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
VPS9D1Q9Y2B5 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.39■□□□□ 0.05
VPS9D1Q9Y2B5 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.38■□□□□ 0.05
VPS9D1Q9Y2B5 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VPS9D1Q9Y2B5 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
VPS9D1Q9Y2B5 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.38■□□□□ 0.05
VPS9D1Q9Y2B5 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
VPS9D1Q9Y2B5 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.38■□□□□ 0.05
VPS9D1Q9Y2B5 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.38■□□□□ 0.05
VPS9D1Q9Y2B5 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VPS9D1Q9Y2B5 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
VPS9D1Q9Y2B5 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VPS9D1Q9Y2B5 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VPS9D1Q9Y2B5 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.38■□□□□ 0.05
VPS9D1Q9Y2B5 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
VPS9D1Q9Y2B5 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
VPS9D1Q9Y2B5 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VPS9D1Q9Y2B5 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.38■□□□□ 0.05
VPS9D1Q9Y2B5 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
VPS9D1Q9Y2B5 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
VPS9D1Q9Y2B5 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.38■□□□□ 0.05
VPS9D1Q9Y2B5 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VPS9D1Q9Y2B5 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.38■□□□□ 0.05
VPS9D1Q9Y2B5 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.38■□□□□ 0.05
VPS9D1Q9Y2B5 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.38■□□□□ 0.05
VPS9D1Q9Y2B5 AC104457.1-201ENST00000401024 814 ntBASIC15.38■□□□□ 0.05
VPS9D1Q9Y2B5 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.38■□□□□ 0.05
VPS9D1Q9Y2B5 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
VPS9D1Q9Y2B5 AC135586.1-201ENST00000539323 574 ntBASIC15.38■□□□□ 0.05
VPS9D1Q9Y2B5 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
VPS9D1Q9Y2B5 AC122134.1-202ENST00000569111 1201 ntBASIC15.38■□□□□ 0.05
VPS9D1Q9Y2B5 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.38■□□□□ 0.05
VPS9D1Q9Y2B5 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.38■□□□□ 0.05
VPS9D1Q9Y2B5 AP001442.1-203ENST00000596385 876 ntTSL 5 BASIC15.38■□□□□ 0.05
VPS9D1Q9Y2B5 AC093512.1-201ENST00000617969 520 ntBASIC15.38■□□□□ 0.05
VPS9D1Q9Y2B5 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
VPS9D1Q9Y2B5 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
VPS9D1Q9Y2B5 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
VPS9D1Q9Y2B5 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VPS9D1Q9Y2B5 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.38■□□□□ 0.05
VPS9D1Q9Y2B5 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.38■□□□□ 0.05
VPS9D1Q9Y2B5 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
VPS9D1Q9Y2B5 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VPS9D1Q9Y2B5 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
VPS9D1Q9Y2B5 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VPS9D1Q9Y2B5 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VPS9D1Q9Y2B5 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VPS9D1Q9Y2B5 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VPS9D1Q9Y2B5 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VPS9D1Q9Y2B5 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.38■□□□□ 0.05
VPS9D1Q9Y2B5 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
VPS9D1Q9Y2B5 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
VPS9D1Q9Y2B5 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
VPS9D1Q9Y2B5 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
VPS9D1Q9Y2B5 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VPS9D1Q9Y2B5 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms