Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.83□□□□□ -0.2
PARPBPQ9NWS1 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PARPBPQ9NWS1 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
PARPBPQ9NWS1 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
PARPBPQ9NWS1 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
PARPBPQ9NWS1 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
PARPBPQ9NWS1 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
PARPBPQ9NWS1 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PARPBPQ9NWS1 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PARPBPQ9NWS1 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PARPBPQ9NWS1 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
PARPBPQ9NWS1 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
PARPBPQ9NWS1 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PARPBPQ9NWS1 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PARPBPQ9NWS1 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PARPBPQ9NWS1 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
PARPBPQ9NWS1 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.82□□□□□ -0.2
PARPBPQ9NWS1 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PARPBPQ9NWS1 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PARPBPQ9NWS1 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PARPBPQ9NWS1 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.82□□□□□ -0.2
PARPBPQ9NWS1 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
PARPBPQ9NWS1 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
PARPBPQ9NWS1 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PARPBPQ9NWS1 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC13.82□□□□□ -0.2
PARPBPQ9NWS1 CRB3P1-201ENST00000449338 276 ntBASIC13.82□□□□□ -0.2
PARPBPQ9NWS1 AC123567.1-201ENST00000548294 1261 ntBASIC13.82□□□□□ -0.2
PARPBPQ9NWS1 TMEM261P1-201ENST00000604899 340 ntBASIC13.82□□□□□ -0.2
PARPBPQ9NWS1 AL391069.4-201ENST00000609583 481 ntBASIC13.82□□□□□ -0.2
PARPBPQ9NWS1 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.82□□□□□ -0.2
PARPBPQ9NWS1 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
PARPBPQ9NWS1 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PARPBPQ9NWS1 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PARPBPQ9NWS1 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PARPBPQ9NWS1 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PARPBPQ9NWS1 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PARPBPQ9NWS1 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PARPBPQ9NWS1 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PARPBPQ9NWS1 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.82□□□□□ -0.2
PARPBPQ9NWS1 AC084364.1-201ENST00000551967 1556 ntBASIC13.82□□□□□ -0.2
PARPBPQ9NWS1 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PARPBPQ9NWS1 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
PARPBPQ9NWS1 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.82□□□□□ -0.2
PARPBPQ9NWS1 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
PARPBPQ9NWS1 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PARPBPQ9NWS1 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PARPBPQ9NWS1 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PARPBPQ9NWS1 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.82□□□□□ -0.2
PARPBPQ9NWS1 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PARPBPQ9NWS1 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
PARPBPQ9NWS1 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.82□□□□□ -0.2
PARPBPQ9NWS1 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 CLK3P2-201ENST00000427566 1453 ntBASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 MYCLP2-201ENST00000449268 967 ntBASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 API5-211ENST00000534695 560 ntTSL 5 BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 TP53TG3HP-202ENST00000569755 579 ntBASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms