Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC16.27■□□□□ 0.2
CD248Q9HCU0 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD248Q9HCU0 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD248Q9HCU0 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD248Q9HCU0 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD248Q9HCU0 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD248Q9HCU0 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.27■□□□□ 0.2
CD248Q9HCU0 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.2
CD248Q9HCU0 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC16.27■□□□□ 0.2
CD248Q9HCU0 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD248Q9HCU0 CYP4F24P-201ENST00000586049 1580 ntBASIC16.27■□□□□ 0.2
CD248Q9HCU0 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CD248Q9HCU0 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD248Q9HCU0 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD248Q9HCU0 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD248Q9HCU0 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.27■□□□□ 0.2
CD248Q9HCU0 ATP5G2P4-201ENST00000442175 420 ntBASIC16.27■□□□□ 0.2
CD248Q9HCU0 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.27■□□□□ 0.2
CD248Q9HCU0 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.27■□□□□ 0.2
CD248Q9HCU0 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD248Q9HCU0 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.27■□□□□ 0.2
CD248Q9HCU0 RN7SL752P-201ENST00000463779 287 ntBASIC16.27■□□□□ 0.2
CD248Q9HCU0 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.27■□□□□ 0.2
CD248Q9HCU0 ELK1P1-201ENST00000485699 580 ntBASIC16.27■□□□□ 0.2
CD248Q9HCU0 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CD248Q9HCU0 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.27■□□□□ 0.2
CD248Q9HCU0 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.27■□□□□ 0.2
CD248Q9HCU0 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.27■□□□□ 0.2
CD248Q9HCU0 MIR6752-201ENST00000618442 71 ntBASIC16.27■□□□□ 0.2
CD248Q9HCU0 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.27■□□□□ 0.2
CD248Q9HCU0 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CD248Q9HCU0 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.27■□□□□ 0.2
CD248Q9HCU0 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD248Q9HCU0 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CD248Q9HCU0 AP003680.1-201ENST00000598970 3660 ntBASIC16.27■□□□□ 0.19
CD248Q9HCU0 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CD248Q9HCU0 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CD248Q9HCU0 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.27■□□□□ 0.19
CD248Q9HCU0 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CD248Q9HCU0 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CD248Q9HCU0 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CD248Q9HCU0 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CD248Q9HCU0 AC232323.1-201ENST00000540724 2099 ntBASIC16.26■□□□□ 0.19
CD248Q9HCU0 REXO1L5P-201ENST00000622260 2098 ntBASIC16.26■□□□□ 0.19
CD248Q9HCU0 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.26■□□□□ 0.19
CD248Q9HCU0 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16.26■□□□□ 0.19
CD248Q9HCU0 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD248Q9HCU0 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CD248Q9HCU0 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD248Q9HCU0 PTENP1-202ENST00000532280 3996 ntBASIC16.26■□□□□ 0.19
CD248Q9HCU0 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CD248Q9HCU0 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD248Q9HCU0 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC16.26■□□□□ 0.19
CD248Q9HCU0 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD248Q9HCU0 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CD248Q9HCU0 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CD248Q9HCU0 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.26■□□□□ 0.19
CD248Q9HCU0 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.26■□□□□ 0.19
CD248Q9HCU0 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CD248Q9HCU0 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CD248Q9HCU0 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.26■□□□□ 0.19
CD248Q9HCU0 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.26■□□□□ 0.19
CD248Q9HCU0 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.26■□□□□ 0.19
CD248Q9HCU0 TPRX2P-201ENST00000535362 881 ntBASIC16.26■□□□□ 0.19
CD248Q9HCU0 CTBP2P3-201ENST00000585629 1255 ntBASIC16.26■□□□□ 0.19
CD248Q9HCU0 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CD248Q9HCU0 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CD248Q9HCU0 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD248Q9HCU0 AL162274.1-201ENST00000617191 1098 ntBASIC16.26■□□□□ 0.19
CD248Q9HCU0 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CD248Q9HCU0 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD248Q9HCU0 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD248Q9HCU0 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.26■□□□□ 0.19
CD248Q9HCU0 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD248Q9HCU0 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.26■□□□□ 0.19
CD248Q9HCU0 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.26■□□□□ 0.19
CD248Q9HCU0 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.26■□□□□ 0.19
CD248Q9HCU0 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD248Q9HCU0 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.26■□□□□ 0.19
CD248Q9HCU0 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.26■□□□□ 0.19
CD248Q9HCU0 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.26■□□□□ 0.19
CD248Q9HCU0 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CD248Q9HCU0 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD248Q9HCU0 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CD248Q9HCU0 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.25■□□□□ 0.19
CD248Q9HCU0 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CD248Q9HCU0 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD248Q9HCU0 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CD248Q9HCU0 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC16.25■□□□□ 0.19
CD248Q9HCU0 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC16.25■□□□□ 0.19
CD248Q9HCU0 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CD248Q9HCU0 LINC01101-201ENST00000622953 1884 ntBASIC16.25■□□□□ 0.19
CD248Q9HCU0 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD248Q9HCU0 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.25■□□□□ 0.19
CD248Q9HCU0 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.25■□□□□ 0.19
CD248Q9HCU0 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD248Q9HCU0 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD248Q9HCU0 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD248Q9HCU0 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD248Q9HCU0 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms