Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.21□□□□□ -0.13
TRIM2Q9C040 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM2Q9C040 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
TRIM2Q9C040 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM2Q9C040 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM2Q9C040 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.21□□□□□ -0.13
TRIM2Q9C040 CICP11-201ENST00000434745 2827 ntBASIC14.21□□□□□ -0.14
TRIM2Q9C040 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.14
TRIM2Q9C040 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRIM2Q9C040 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRIM2Q9C040 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.21□□□□□ -0.14
TRIM2Q9C040 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.21□□□□□ -0.14
TRIM2Q9C040 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.21□□□□□ -0.14
TRIM2Q9C040 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
TRIM2Q9C040 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRIM2Q9C040 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
TRIM2Q9C040 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRIM2Q9C040 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM2Q9C040 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM2Q9C040 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM2Q9C040 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM2Q9C040 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM2Q9C040 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.2□□□□□ -0.14
TRIM2Q9C040 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM2Q9C040 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.2□□□□□ -0.14
TRIM2Q9C040 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM2Q9C040 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM2Q9C040 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM2Q9C040 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.2□□□□□ -0.14
TRIM2Q9C040 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.2□□□□□ -0.14
TRIM2Q9C040 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM2Q9C040 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM2Q9C040 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM2Q9C040 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.2□□□□□ -0.14
TRIM2Q9C040 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM2Q9C040 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM2Q9C040 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.2□□□□□ -0.14
TRIM2Q9C040 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM2Q9C040 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.2□□□□□ -0.14
TRIM2Q9C040 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM2Q9C040 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TRIM2Q9C040 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM2Q9C040 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM2Q9C040 LINC01115-203ENST00000606068 577 ntBASIC14.2□□□□□ -0.14
TRIM2Q9C040 AL109936.8-201ENST00000641772 604 ntBASIC14.2□□□□□ -0.14
TRIM2Q9C040 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM2Q9C040 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.2□□□□□ -0.14
TRIM2Q9C040 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM2Q9C040 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM2Q9C040 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM2Q9C040 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM2Q9C040 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
TRIM2Q9C040 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM2Q9C040 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM2Q9C040 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM2Q9C040 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM2Q9C040 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM2Q9C040 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
TRIM2Q9C040 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM2Q9C040 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.19□□□□□ -0.14
TRIM2Q9C040 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM2Q9C040 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
TRIM2Q9C040 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM2Q9C040 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.19□□□□□ -0.14
TRIM2Q9C040 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM2Q9C040 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
TRIM2Q9C040 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM2Q9C040 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.19□□□□□ -0.14
TRIM2Q9C040 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
TRIM2Q9C040 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM2Q9C040 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM2Q9C040 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
TRIM2Q9C040 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM2Q9C040 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM2Q9C040 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM2Q9C040 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.19□□□□□ -0.14
TRIM2Q9C040 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.19□□□□□ -0.14
TRIM2Q9C040 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM2Q9C040 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.19□□□□□ -0.14
TRIM2Q9C040 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.19□□□□□ -0.14
TRIM2Q9C040 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.19□□□□□ -0.14
TRIM2Q9C040 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.19□□□□□ -0.14
TRIM2Q9C040 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.19□□□□□ -0.14
TRIM2Q9C040 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.19□□□□□ -0.14
TRIM2Q9C040 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.19□□□□□ -0.14
TRIM2Q9C040 ZNF890P-202ENST00000530367 1156 ntBASIC14.19□□□□□ -0.14
TRIM2Q9C040 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.19□□□□□ -0.14
TRIM2Q9C040 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM2Q9C040 AC138761.1-201ENST00000584393 385 ntBASIC14.19□□□□□ -0.14
TRIM2Q9C040 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.19□□□□□ -0.14
TRIM2Q9C040 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.19□□□□□ -0.14
TRIM2Q9C040 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM2Q9C040 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM2Q9C040 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM2Q9C040 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM2Q9C040 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.19□□□□□ -0.14
TRIM2Q9C040 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM2Q9C040 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM2Q9C040 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
TRIM2Q9C040 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms