Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDK5RAP1Q96SZ6 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.92■□□□□ 0.14
CDK5RAP1Q96SZ6 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.92■□□□□ 0.14
CDK5RAP1Q96SZ6 CD8B2-202ENST00000417670 633 ntBASIC15.92■□□□□ 0.14
CDK5RAP1Q96SZ6 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.92■□□□□ 0.14
CDK5RAP1Q96SZ6 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.92■□□□□ 0.14
CDK5RAP1Q96SZ6 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.92■□□□□ 0.14
CDK5RAP1Q96SZ6 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDK5RAP1Q96SZ6 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.92■□□□□ 0.14
CDK5RAP1Q96SZ6 MIR6775-201ENST00000617557 69 ntBASIC15.92■□□□□ 0.14
CDK5RAP1Q96SZ6 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.92■□□□□ 0.14
CDK5RAP1Q96SZ6 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.92■□□□□ 0.14
CDK5RAP1Q96SZ6 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.92■□□□□ 0.14
CDK5RAP1Q96SZ6 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDK5RAP1Q96SZ6 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDK5RAP1Q96SZ6 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDK5RAP1Q96SZ6 AC148477.4-201ENST00000613430 1793 ntBASIC15.92■□□□□ 0.14
CDK5RAP1Q96SZ6 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
CDK5RAP1Q96SZ6 AL138709.1-201ENST00000614840 1693 ntBASIC15.92■□□□□ 0.14
CDK5RAP1Q96SZ6 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDK5RAP1Q96SZ6 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
CDK5RAP1Q96SZ6 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDK5RAP1Q96SZ6 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDK5RAP1Q96SZ6 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDK5RAP1Q96SZ6 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDK5RAP1Q96SZ6 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CDK5RAP1Q96SZ6 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.91■□□□□ 0.14
CDK5RAP1Q96SZ6 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CDK5RAP1Q96SZ6 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDK5RAP1Q96SZ6 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CDK5RAP1Q96SZ6 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDK5RAP1Q96SZ6 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDK5RAP1Q96SZ6 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDK5RAP1Q96SZ6 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CDK5RAP1Q96SZ6 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC15.91■□□□□ 0.14
CDK5RAP1Q96SZ6 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDK5RAP1Q96SZ6 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.91■□□□□ 0.14
CDK5RAP1Q96SZ6 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDK5RAP1Q96SZ6 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.91■□□□□ 0.14
CDK5RAP1Q96SZ6 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.91■□□□□ 0.14
CDK5RAP1Q96SZ6 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.91■□□□□ 0.14
CDK5RAP1Q96SZ6 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.91■□□□□ 0.14
CDK5RAP1Q96SZ6 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDK5RAP1Q96SZ6 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CDK5RAP1Q96SZ6 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.91■□□□□ 0.14
CDK5RAP1Q96SZ6 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDK5RAP1Q96SZ6 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.91■□□□□ 0.14
CDK5RAP1Q96SZ6 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.91■□□□□ 0.14
CDK5RAP1Q96SZ6 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CDK5RAP1Q96SZ6 CNN2P8-201ENST00000421872 913 ntBASIC15.91■□□□□ 0.14
CDK5RAP1Q96SZ6 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.91■□□□□ 0.14
CDK5RAP1Q96SZ6 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CDK5RAP1Q96SZ6 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.91■□□□□ 0.14
CDK5RAP1Q96SZ6 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CDK5RAP1Q96SZ6 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDK5RAP1Q96SZ6 AC007950.2-201ENST00000615045 2347 ntBASIC15.91■□□□□ 0.14
CDK5RAP1Q96SZ6 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDK5RAP1Q96SZ6 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDK5RAP1Q96SZ6 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.91■□□□□ 0.14
CDK5RAP1Q96SZ6 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDK5RAP1Q96SZ6 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.91■□□□□ 0.14
CDK5RAP1Q96SZ6 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDK5RAP1Q96SZ6 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CDK5RAP1Q96SZ6 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.91■□□□□ 0.14
CDK5RAP1Q96SZ6 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.91■□□□□ 0.14
CDK5RAP1Q96SZ6 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDK5RAP1Q96SZ6 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CDK5RAP1Q96SZ6 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CDK5RAP1Q96SZ6 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.91■□□□□ 0.14
CDK5RAP1Q96SZ6 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.91■□□□□ 0.14
CDK5RAP1Q96SZ6 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CDK5RAP1Q96SZ6 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDK5RAP1Q96SZ6 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
CDK5RAP1Q96SZ6 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDK5RAP1Q96SZ6 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDK5RAP1Q96SZ6 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDK5RAP1Q96SZ6 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDK5RAP1Q96SZ6 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CDK5RAP1Q96SZ6 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDK5RAP1Q96SZ6 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDK5RAP1Q96SZ6 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.9■□□□□ 0.14
CDK5RAP1Q96SZ6 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDK5RAP1Q96SZ6 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CDK5RAP1Q96SZ6 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CDK5RAP1Q96SZ6 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.9■□□□□ 0.14
CDK5RAP1Q96SZ6 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
CDK5RAP1Q96SZ6 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.9■□□□□ 0.14
CDK5RAP1Q96SZ6 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
CDK5RAP1Q96SZ6 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.9■□□□□ 0.14
CDK5RAP1Q96SZ6 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDK5RAP1Q96SZ6 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.9■□□□□ 0.14
CDK5RAP1Q96SZ6 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDK5RAP1Q96SZ6 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDK5RAP1Q96SZ6 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.9■□□□□ 0.14
CDK5RAP1Q96SZ6 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.9■□□□□ 0.14
CDK5RAP1Q96SZ6 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.9■□□□□ 0.14
CDK5RAP1Q96SZ6 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.9■□□□□ 0.14
CDK5RAP1Q96SZ6 RNA5SP486-201ENST00000515961 83 ntBASIC15.9■□□□□ 0.14
CDK5RAP1Q96SZ6 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CDK5RAP1Q96SZ6 SNX29P1-201ENST00000548357 1007 ntBASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms