Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLCC1Q96S66 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CLCC1Q96S66 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.07□□□□□ -0.32
CLCC1Q96S66 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC13.07□□□□□ -0.32
CLCC1Q96S66 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC13.07□□□□□ -0.32
CLCC1Q96S66 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.07□□□□□ -0.32
CLCC1Q96S66 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC13.07□□□□□ -0.32
CLCC1Q96S66 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
CLCC1Q96S66 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.07□□□□□ -0.32
CLCC1Q96S66 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CLCC1Q96S66 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.07□□□□□ -0.32
CLCC1Q96S66 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLCC1Q96S66 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.07□□□□□ -0.32
CLCC1Q96S66 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CLCC1Q96S66 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLCC1Q96S66 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLCC1Q96S66 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLCC1Q96S66 AC006504.5-208ENST00000588784 2401 ntBASIC13.07□□□□□ -0.32
CLCC1Q96S66 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CLCC1Q96S66 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLCC1Q96S66 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLCC1Q96S66 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.06□□□□□ -0.32
CLCC1Q96S66 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLCC1Q96S66 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.06□□□□□ -0.32
CLCC1Q96S66 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.06□□□□□ -0.32
CLCC1Q96S66 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.06□□□□□ -0.32
CLCC1Q96S66 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLCC1Q96S66 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLCC1Q96S66 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
CLCC1Q96S66 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CLCC1Q96S66 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLCC1Q96S66 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.06□□□□□ -0.32
CLCC1Q96S66 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CLCC1Q96S66 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.06□□□□□ -0.32
CLCC1Q96S66 AC020658.6-201ENST00000623564 1870 ntBASIC13.06□□□□□ -0.32
CLCC1Q96S66 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
CLCC1Q96S66 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.06□□□□□ -0.32
CLCC1Q96S66 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLCC1Q96S66 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CLCC1Q96S66 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.06□□□□□ -0.32
CLCC1Q96S66 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLCC1Q96S66 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.06□□□□□ -0.32
CLCC1Q96S66 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.06□□□□□ -0.32
CLCC1Q96S66 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.06□□□□□ -0.32
CLCC1Q96S66 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CLCC1Q96S66 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLCC1Q96S66 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.06□□□□□ -0.32
CLCC1Q96S66 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CLCC1Q96S66 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.06□□□□□ -0.32
CLCC1Q96S66 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLCC1Q96S66 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CLCC1Q96S66 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC13.06□□□□□ -0.32
CLCC1Q96S66 AC245100.5-201ENST00000452108 331 ntBASIC13.06□□□□□ -0.32
CLCC1Q96S66 PRYP6-201ENST00000514804 343 ntBASIC13.06□□□□□ -0.32
CLCC1Q96S66 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CLCC1Q96S66 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.06□□□□□ -0.32
CLCC1Q96S66 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.06□□□□□ -0.32
CLCC1Q96S66 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.06□□□□□ -0.32
CLCC1Q96S66 RARRES2P8-201ENST00000566335 367 ntBASIC13.06□□□□□ -0.32
CLCC1Q96S66 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC13.06□□□□□ -0.32
CLCC1Q96S66 AC099522.2-201ENST00000607001 744 ntBASIC13.06□□□□□ -0.32
CLCC1Q96S66 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CLCC1Q96S66 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLCC1Q96S66 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.06□□□□□ -0.32
CLCC1Q96S66 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CLCC1Q96S66 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
CLCC1Q96S66 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLCC1Q96S66 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLCC1Q96S66 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLCC1Q96S66 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.06□□□□□ -0.32
CLCC1Q96S66 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CLCC1Q96S66 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
CLCC1Q96S66 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CLCC1Q96S66 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.06□□□□□ -0.32
CLCC1Q96S66 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.06□□□□□ -0.32
CLCC1Q96S66 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC13.06□□□□□ -0.32
CLCC1Q96S66 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLCC1Q96S66 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
CLCC1Q96S66 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CLCC1Q96S66 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
CLCC1Q96S66 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
CLCC1Q96S66 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CLCC1Q96S66 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CLCC1Q96S66 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CLCC1Q96S66 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CLCC1Q96S66 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CLCC1Q96S66 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CLCC1Q96S66 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CLCC1Q96S66 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CLCC1Q96S66 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CLCC1Q96S66 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CLCC1Q96S66 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CLCC1Q96S66 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CLCC1Q96S66 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CLCC1Q96S66 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CLCC1Q96S66 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CLCC1Q96S66 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CLCC1Q96S66 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CLCC1Q96S66 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.05□□□□□ -0.32
CLCC1Q96S66 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms