Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC18.3■□□□□ 0.52
DDX11Q96FC9 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DDX11Q96FC9 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DDX11Q96FC9 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
DDX11Q96FC9 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
DDX11Q96FC9 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DDX11Q96FC9 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DDX11Q96FC9 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DDX11Q96FC9 AC023024.2-201ENST00000623561 1993 ntBASIC18.3■□□□□ 0.52
DDX11Q96FC9 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
DDX11Q96FC9 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DDX11Q96FC9 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.3■□□□□ 0.52
DDX11Q96FC9 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DDX11Q96FC9 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DDX11Q96FC9 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
DDX11Q96FC9 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
DDX11Q96FC9 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC18.3■□□□□ 0.52
DDX11Q96FC9 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
DDX11Q96FC9 AC079776.1-201ENST00000401540 1152 ntBASIC18.3■□□□□ 0.52
DDX11Q96FC9 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DDX11Q96FC9 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC18.3■□□□□ 0.52
DDX11Q96FC9 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DDX11Q96FC9 KRT18P64-201ENST00000434946 1219 ntBASIC18.3■□□□□ 0.52
DDX11Q96FC9 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC18.3■□□□□ 0.52
DDX11Q96FC9 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC18.3■□□□□ 0.52
DDX11Q96FC9 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC18.3■□□□□ 0.52
DDX11Q96FC9 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC18.3■□□□□ 0.52
DDX11Q96FC9 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC18.3■□□□□ 0.52
DDX11Q96FC9 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC18.3■□□□□ 0.52
DDX11Q96FC9 APOC4-201ENST00000591600 348 ntTSL 3 BASIC18.3■□□□□ 0.52
DDX11Q96FC9 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC18.3■□□□□ 0.52
DDX11Q96FC9 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DDX11Q96FC9 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DDX11Q96FC9 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
DDX11Q96FC9 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
DDX11Q96FC9 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DDX11Q96FC9 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
DDX11Q96FC9 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DDX11Q96FC9 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC18.3■□□□□ 0.52
DDX11Q96FC9 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DDX11Q96FC9 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC18.3■□□□□ 0.52
DDX11Q96FC9 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DDX11Q96FC9 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
DDX11Q96FC9 AC148477.4-201ENST00000613430 1793 ntBASIC18.3■□□□□ 0.52
DDX11Q96FC9 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
DDX11Q96FC9 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
DDX11Q96FC9 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DDX11Q96FC9 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DDX11Q96FC9 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC18.29■□□□□ 0.52
DDX11Q96FC9 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DDX11Q96FC9 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DDX11Q96FC9 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DDX11Q96FC9 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DDX11Q96FC9 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
DDX11Q96FC9 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
DDX11Q96FC9 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
DDX11Q96FC9 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18.29■□□□□ 0.52
DDX11Q96FC9 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
DDX11Q96FC9 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DDX11Q96FC9 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC18.29■□□□□ 0.52
DDX11Q96FC9 AC006058.4-201ENST00000624016 1670 ntBASIC18.29■□□□□ 0.52
DDX11Q96FC9 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DDX11Q96FC9 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
DDX11Q96FC9 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
DDX11Q96FC9 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
DDX11Q96FC9 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
DDX11Q96FC9 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
DDX11Q96FC9 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC18.29■□□□□ 0.52
DDX11Q96FC9 RHOA-206ENST00000454011 889 ntTSL 2 BASIC18.29■□□□□ 0.52
DDX11Q96FC9 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC18.29■□□□□ 0.52
DDX11Q96FC9 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
DDX11Q96FC9 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.29■□□□□ 0.52
DDX11Q96FC9 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC18.29■□□□□ 0.52
DDX11Q96FC9 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
DDX11Q96FC9 MIR8072-201ENST00000614241 80 ntBASIC18.29■□□□□ 0.52
DDX11Q96FC9 MIR6805-201ENST00000615055 62 ntBASIC18.29■□□□□ 0.52
DDX11Q96FC9 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.29■□□□□ 0.52
DDX11Q96FC9 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC18.29■□□□□ 0.52
DDX11Q96FC9 AL033527.5-201ENST00000641382 801 ntBASIC18.29■□□□□ 0.52
DDX11Q96FC9 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
DDX11Q96FC9 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC18.29■□□□□ 0.52
DDX11Q96FC9 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DDX11Q96FC9 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
DDX11Q96FC9 GSN-203ENST00000373808 2664 ntTSL 2 BASIC18.29■□□□□ 0.52
DDX11Q96FC9 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC18.29■□□□□ 0.52
DDX11Q96FC9 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
DDX11Q96FC9 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DDX11Q96FC9 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DDX11Q96FC9 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
DDX11Q96FC9 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
DDX11Q96FC9 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
DDX11Q96FC9 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
DDX11Q96FC9 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DDX11Q96FC9 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DDX11Q96FC9 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DDX11Q96FC9 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
DDX11Q96FC9 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
DDX11Q96FC9 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC18.28■□□□□ 0.52
DDX11Q96FC9 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
DDX11Q96FC9 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms