Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 AC211486.1-202ENST00000416371 468 ntBASIC17.4■□□□□ 0.38
SMARCE1Q969G3 FAM8A3P-201ENST00000427218 844 ntBASIC17.4■□□□□ 0.38
SMARCE1Q969G3 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.4■□□□□ 0.38
SMARCE1Q969G3 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.4■□□□□ 0.38
SMARCE1Q969G3 KRT18P64-201ENST00000434946 1219 ntBASIC17.4■□□□□ 0.38
SMARCE1Q969G3 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.4■□□□□ 0.38
SMARCE1Q969G3 SERBP1P3-201ENST00000459980 809 ntBASIC17.4■□□□□ 0.38
SMARCE1Q969G3 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SMARCE1Q969G3 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SMARCE1Q969G3 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.4■□□□□ 0.38
SMARCE1Q969G3 AC211476.1-201ENST00000503899 468 ntBASIC17.4■□□□□ 0.38
SMARCE1Q969G3 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.4■□□□□ 0.38
SMARCE1Q969G3 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMARCE1Q969G3 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC17.4■□□□□ 0.38
SMARCE1Q969G3 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMARCE1Q969G3 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMARCE1Q969G3 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SMARCE1Q969G3 ACE3P-201ENST00000423435 1973 ntBASIC17.4■□□□□ 0.38
SMARCE1Q969G3 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SMARCE1Q969G3 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMARCE1Q969G3 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMARCE1Q969G3 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC17.4■□□□□ 0.38
SMARCE1Q969G3 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SMARCE1Q969G3 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMARCE1Q969G3 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC17.4■□□□□ 0.38
SMARCE1Q969G3 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC17.4■□□□□ 0.38
SMARCE1Q969G3 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.39■□□□□ 0.38
SMARCE1Q969G3 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMARCE1Q969G3 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMARCE1Q969G3 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMARCE1Q969G3 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SMARCE1Q969G3 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMARCE1Q969G3 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMARCE1Q969G3 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.39■□□□□ 0.37
SMARCE1Q969G3 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMARCE1Q969G3 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMARCE1Q969G3 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMARCE1Q969G3 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMARCE1Q969G3 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMARCE1Q969G3 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
SMARCE1Q969G3 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.39■□□□□ 0.37
SMARCE1Q969G3 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.39■□□□□ 0.37
SMARCE1Q969G3 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
SMARCE1Q969G3 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMARCE1Q969G3 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SMARCE1Q969G3 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.39■□□□□ 0.37
SMARCE1Q969G3 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SMARCE1Q969G3 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SMARCE1Q969G3 AC025048.3-201ENST00000590609 569 ntBASIC17.39■□□□□ 0.37
SMARCE1Q969G3 AC005702.4-201ENST00000618393 416 ntBASIC17.39■□□□□ 0.37
SMARCE1Q969G3 LINC00628-201ENST00000628516 1289 ntBASIC17.39■□□□□ 0.37
SMARCE1Q969G3 AL033527.5-202ENST00000641632 1098 ntBASIC17.39■□□□□ 0.37
SMARCE1Q969G3 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMARCE1Q969G3 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMARCE1Q969G3 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC17.39■□□□□ 0.37
SMARCE1Q969G3 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMARCE1Q969G3 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMARCE1Q969G3 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SMARCE1Q969G3 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMARCE1Q969G3 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC17.39■□□□□ 0.37
SMARCE1Q969G3 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMARCE1Q969G3 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
SMARCE1Q969G3 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC17.39■□□□□ 0.37
SMARCE1Q969G3 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMARCE1Q969G3 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.39■□□□□ 0.37
SMARCE1Q969G3 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SMARCE1Q969G3 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMARCE1Q969G3 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.39■□□□□ 0.37
SMARCE1Q969G3 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMARCE1Q969G3 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SMARCE1Q969G3 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMARCE1Q969G3 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
SMARCE1Q969G3 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMARCE1Q969G3 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.38■□□□□ 0.37
SMARCE1Q969G3 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMARCE1Q969G3 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMARCE1Q969G3 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC17.38■□□□□ 0.37
SMARCE1Q969G3 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.38■□□□□ 0.37
SMARCE1Q969G3 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
SMARCE1Q969G3 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SMARCE1Q969G3 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC17.38■□□□□ 0.37
SMARCE1Q969G3 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMARCE1Q969G3 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.38■□□□□ 0.37
SMARCE1Q969G3 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMARCE1Q969G3 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
SMARCE1Q969G3 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC17.38■□□□□ 0.37
SMARCE1Q969G3 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMARCE1Q969G3 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SMARCE1Q969G3 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SMARCE1Q969G3 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMARCE1Q969G3 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.38■□□□□ 0.37
SMARCE1Q969G3 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.38■□□□□ 0.37
SMARCE1Q969G3 AC011467.4-201ENST00000594891 528 ntBASIC17.38■□□□□ 0.37
SMARCE1Q969G3 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.38■□□□□ 0.37
SMARCE1Q969G3 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC17.38■□□□□ 0.37
SMARCE1Q969G3 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMARCE1Q969G3 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
SMARCE1Q969G3 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMARCE1Q969G3 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMARCE1Q969G3 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms