Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC18.75■□□□□ 0.59
RPGRQ92834 AC100827.2-201ENST00000563214 1194 ntBASIC18.75■□□□□ 0.59
RPGRQ92834 AL603832.2-201ENST00000566195 2125 ntBASIC18.75■□□□□ 0.59
RPGRQ92834 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC18.75■□□□□ 0.59
RPGRQ92834 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC18.75■□□□□ 0.59
RPGRQ92834 SPCS2P2-201ENST00000603270 608 ntBASIC18.75■□□□□ 0.59
RPGRQ92834 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPGRQ92834 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC18.75■□□□□ 0.59
RPGRQ92834 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPGRQ92834 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.75■□□□□ 0.59
RPGRQ92834 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RPGRQ92834 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPGRQ92834 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
RPGRQ92834 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPGRQ92834 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPGRQ92834 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.75■□□□□ 0.59
RPGRQ92834 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.75■□□□□ 0.59
RPGRQ92834 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RPGRQ92834 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPGRQ92834 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPGRQ92834 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
RPGRQ92834 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.75■□□□□ 0.59
RPGRQ92834 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
RPGRQ92834 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.75■□□□□ 0.59
RPGRQ92834 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPGRQ92834 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC18.74■□□□□ 0.59
RPGRQ92834 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPGRQ92834 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC18.74■□□□□ 0.59
RPGRQ92834 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC18.74■□□□□ 0.59
RPGRQ92834 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RPGRQ92834 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC18.74■□□□□ 0.59
RPGRQ92834 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPGRQ92834 AC024909.3-201ENST00000611513 2257 ntBASIC18.74■□□□□ 0.59
RPGRQ92834 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPGRQ92834 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC18.74■□□□□ 0.59
RPGRQ92834 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPGRQ92834 ZBTB45P1-201ENST00000452761 1456 ntBASIC18.74■□□□□ 0.59
RPGRQ92834 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
RPGRQ92834 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPGRQ92834 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RPGRQ92834 MIR33B-201ENST00000385104 96 ntBASIC18.74■□□□□ 0.59
RPGRQ92834 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RPGRQ92834 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPGRQ92834 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RPGRQ92834 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC18.74■□□□□ 0.59
RPGRQ92834 EEF1DP6-201ENST00000449232 372 ntBASIC18.74■□□□□ 0.59
RPGRQ92834 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC18.74■□□□□ 0.59
RPGRQ92834 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC18.74■□□□□ 0.59
RPGRQ92834 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPGRQ92834 CSH2-206ENST00000560142 749 ntTSL 5 BASIC18.74■□□□□ 0.59
RPGRQ92834 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC18.74■□□□□ 0.59
RPGRQ92834 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
RPGRQ92834 AL358472.3-201ENST00000608147 415 ntBASIC18.74■□□□□ 0.59
RPGRQ92834 U62317.3-201ENST00000608319 855 ntBASIC18.74■□□□□ 0.59
RPGRQ92834 AL162426.1-201ENST00000624141 743 ntBASIC18.74■□□□□ 0.59
RPGRQ92834 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
RPGRQ92834 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPGRQ92834 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPGRQ92834 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPGRQ92834 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC18.74■□□□□ 0.59
RPGRQ92834 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
RPGRQ92834 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPGRQ92834 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPGRQ92834 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPGRQ92834 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RPGRQ92834 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPGRQ92834 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC18.73■□□□□ 0.59
RPGRQ92834 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPGRQ92834 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RPGRQ92834 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RPGRQ92834 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC18.73■□□□□ 0.59
RPGRQ92834 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.73■□□□□ 0.59
RPGRQ92834 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RPGRQ92834 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RPGRQ92834 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RPGRQ92834 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPGRQ92834 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPGRQ92834 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC18.73■□□□□ 0.59
RPGRQ92834 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC18.73■□□□□ 0.59
RPGRQ92834 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
RPGRQ92834 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RPGRQ92834 RN7SKP175-201ENST00000408472 289 ntBASIC18.73■□□□□ 0.59
RPGRQ92834 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC18.73■□□□□ 0.59
RPGRQ92834 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC18.73■□□□□ 0.59
RPGRQ92834 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RPGRQ92834 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC18.73■□□□□ 0.59
RPGRQ92834 AL161670.2-201ENST00000557650 1227 ntBASIC18.73■□□□□ 0.59
RPGRQ92834 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC18.73■□□□□ 0.59
RPGRQ92834 NAT9-224ENST00000583757 583 ntTSL 3 BASIC18.73■□□□□ 0.59
RPGRQ92834 AL136295.7-201ENST00000619226 1200 ntBASIC18.73■□□□□ 0.59
RPGRQ92834 AC002472.3-201ENST00000640124 621 ntBASIC18.73■□□□□ 0.59
RPGRQ92834 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC18.73■□□□□ 0.59
RPGRQ92834 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RPGRQ92834 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
RPGRQ92834 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.73■□□□□ 0.59
RPGRQ92834 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPGRQ92834 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
RPGRQ92834 AL157414.3-201ENST00000624276 1954 ntBASIC18.73■□□□□ 0.59
RPGRQ92834 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RPGRQ92834 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms